Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm38002-201ENSMUST00000193255 180 ntBASIC15.19■□□□□ 0.02
Alx1Q8C8B0 Gm43630-201ENSMUST00000201550 776 ntBASIC15.19■□□□□ 0.02
Alx1Q8C8B0 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC15.19■□□□□ 0.02
Alx1Q8C8B0 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alx1Q8C8B0 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Alx1Q8C8B0 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alx1Q8C8B0 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alx1Q8C8B0 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Alx1Q8C8B0 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Alx1Q8C8B0 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alx1Q8C8B0 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alx1Q8C8B0 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Alx1Q8C8B0 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alx1Q8C8B0 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alx1Q8C8B0 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alx1Q8C8B0 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Alx1Q8C8B0 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alx1Q8C8B0 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC15.18■□□□□ 0.02
Alx1Q8C8B0 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Gm12329-201ENSMUST00000120829 1007 ntBASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC15.18■□□□□ 0.02
Alx1Q8C8B0 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Gm6652-201ENSMUST00000186414 1070 ntBASIC15.18■□□□□ 0.02
Alx1Q8C8B0 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Alx1Q8C8B0 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Gm10478-201ENSMUST00000084451 396 ntBASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Alx1Q8C8B0 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Gm6992-201ENSMUST00000217973 1607 ntBASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Ssr1-203ENSMUST00000225246 1825 ntBASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Gm17420-201ENSMUST00000164753 153 ntBASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Gm5850-201ENSMUST00000192923 1206 ntBASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Alx1Q8C8B0 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms