Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cps1Q8C196 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cps1Q8C196 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cps1Q8C196 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cps1Q8C196 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cps1Q8C196 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cps1Q8C196 Gm21998-201ENSMUST00000117552 1308 ntBASIC17.19■□□□□ 0.34
Cps1Q8C196 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cps1Q8C196 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cps1Q8C196 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cps1Q8C196 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cps1Q8C196 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cps1Q8C196 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cps1Q8C196 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cps1Q8C196 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC17.19■□□□□ 0.34
Cps1Q8C196 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cps1Q8C196 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Cps1Q8C196 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC17.19■□□□□ 0.34
Cps1Q8C196 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC17.19■□□□□ 0.34
Cps1Q8C196 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cps1Q8C196 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC17.19■□□□□ 0.34
Cps1Q8C196 AC153954.1-201ENSMUST00000216959 255 ntBASIC17.19■□□□□ 0.34
Cps1Q8C196 AC140293.1-201ENSMUST00000225626 1247 ntBASIC17.19■□□□□ 0.34
Cps1Q8C196 Gm5455-201ENSMUST00000058710 715 ntBASIC17.19■□□□□ 0.34
Cps1Q8C196 Ginm1-202ENSMUST00000065124 300 ntBASIC17.19■□□□□ 0.34
Cps1Q8C196 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cps1Q8C196 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cps1Q8C196 AC137842.1-201ENSMUST00000227896 2064 ntBASIC17.19■□□□□ 0.34
Cps1Q8C196 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cps1Q8C196 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cps1Q8C196 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cps1Q8C196 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cps1Q8C196 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cps1Q8C196 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cps1Q8C196 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC17.19■□□□□ 0.34
Cps1Q8C196 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cps1Q8C196 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Cps1Q8C196 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cps1Q8C196 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cps1Q8C196 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cps1Q8C196 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cps1Q8C196 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cps1Q8C196 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cps1Q8C196 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cps1Q8C196 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC17.18■□□□□ 0.34
Cps1Q8C196 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC17.18■□□□□ 0.34
Cps1Q8C196 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC17.18■□□□□ 0.34
Cps1Q8C196 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC17.18■□□□□ 0.34
Cps1Q8C196 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC17.18■□□□□ 0.34
Cps1Q8C196 Gm4797-201ENSMUST00000219075 1283 ntBASIC17.18■□□□□ 0.34
Cps1Q8C196 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC17.18■□□□□ 0.34
Cps1Q8C196 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cps1Q8C196 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cps1Q8C196 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cps1Q8C196 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cps1Q8C196 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cps1Q8C196 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cps1Q8C196 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cps1Q8C196 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cps1Q8C196 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cps1Q8C196 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cps1Q8C196 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cps1Q8C196 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cps1Q8C196 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cps1Q8C196 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cps1Q8C196 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cps1Q8C196 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC17.17■□□□□ 0.34
Cps1Q8C196 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cps1Q8C196 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cps1Q8C196 Gm23596-201ENSMUST00000104304 132 ntBASIC17.17■□□□□ 0.34
Cps1Q8C196 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Cps1Q8C196 Mup-ps26-201ENSMUST00000121751 202 ntBASIC17.17■□□□□ 0.34
Cps1Q8C196 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cps1Q8C196 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC17.17■□□□□ 0.34
Cps1Q8C196 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cps1Q8C196 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cps1Q8C196 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cps1Q8C196 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cps1Q8C196 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC17.17■□□□□ 0.34
Cps1Q8C196 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.17■□□□□ 0.34
Cps1Q8C196 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC17.17■□□□□ 0.34
Cps1Q8C196 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cps1Q8C196 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Cps1Q8C196 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cps1Q8C196 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC17.17■□□□□ 0.34
Cps1Q8C196 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cps1Q8C196 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.17■□□□□ 0.34
Cps1Q8C196 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cps1Q8C196 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cps1Q8C196 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cps1Q8C196 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC17.16■□□□□ 0.34
Cps1Q8C196 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC17.16■□□□□ 0.34
Cps1Q8C196 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC17.16■□□□□ 0.34
Cps1Q8C196 Gm42682-201ENSMUST00000198349 1265 ntBASIC17.16■□□□□ 0.34
Cps1Q8C196 Gm45909-201ENSMUST00000212413 1031 ntBASIC17.16■□□□□ 0.34
Cps1Q8C196 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cps1Q8C196 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cps1Q8C196 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cps1Q8C196 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cps1Q8C196 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms