Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim47Q8C0E3 Gm38116-201ENSMUST00000193873 1533 ntBASIC14.46□□□□□ -0.09
Trim47Q8C0E3 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim47Q8C0E3 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trim47Q8C0E3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim47Q8C0E3 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim47Q8C0E3 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim47Q8C0E3 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.46□□□□□ -0.09
Trim47Q8C0E3 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim47Q8C0E3 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.46□□□□□ -0.09
Trim47Q8C0E3 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.46□□□□□ -0.09
Trim47Q8C0E3 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.46□□□□□ -0.09
Trim47Q8C0E3 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
Trim47Q8C0E3 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim47Q8C0E3 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.46□□□□□ -0.09
Trim47Q8C0E3 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trim47Q8C0E3 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim47Q8C0E3 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.46□□□□□ -0.09
Trim47Q8C0E3 AC166051.1-201ENSMUST00000214313 210 ntBASIC14.46□□□□□ -0.09
Trim47Q8C0E3 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
Trim47Q8C0E3 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trim47Q8C0E3 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim47Q8C0E3 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trim47Q8C0E3 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trim47Q8C0E3 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim47Q8C0E3 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim47Q8C0E3 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim47Q8C0E3 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim47Q8C0E3 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim47Q8C0E3 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim47Q8C0E3 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim47Q8C0E3 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim47Q8C0E3 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trim47Q8C0E3 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim47Q8C0E3 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim47Q8C0E3 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim47Q8C0E3 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.45□□□□□ -0.1
Trim47Q8C0E3 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim47Q8C0E3 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.45□□□□□ -0.1
Trim47Q8C0E3 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim47Q8C0E3 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim47Q8C0E3 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim47Q8C0E3 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim47Q8C0E3 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim47Q8C0E3 Snord83b-201ENSMUST00000104546 94 ntBASIC14.45□□□□□ -0.1
Trim47Q8C0E3 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim47Q8C0E3 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim47Q8C0E3 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.45□□□□□ -0.1
Trim47Q8C0E3 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.45□□□□□ -0.1
Trim47Q8C0E3 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.45□□□□□ -0.1
Trim47Q8C0E3 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim47Q8C0E3 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim47Q8C0E3 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.45□□□□□ -0.1
Trim47Q8C0E3 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim47Q8C0E3 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.45□□□□□ -0.1
Trim47Q8C0E3 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.45□□□□□ -0.1
Trim47Q8C0E3 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim47Q8C0E3 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.45□□□□□ -0.1
Trim47Q8C0E3 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim47Q8C0E3 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim47Q8C0E3 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim47Q8C0E3 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim47Q8C0E3 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim47Q8C0E3 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim47Q8C0E3 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim47Q8C0E3 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim47Q8C0E3 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trim47Q8C0E3 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim47Q8C0E3 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim47Q8C0E3 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim47Q8C0E3 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim47Q8C0E3 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim47Q8C0E3 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim47Q8C0E3 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.44□□□□□ -0.1
Trim47Q8C0E3 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim47Q8C0E3 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim47Q8C0E3 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim47Q8C0E3 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trim47Q8C0E3 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim47Q8C0E3 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim47Q8C0E3 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim47Q8C0E3 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim47Q8C0E3 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim47Q8C0E3 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Trim47Q8C0E3 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
Trim47Q8C0E3 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.44□□□□□ -0.1
Trim47Q8C0E3 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.44□□□□□ -0.1
Trim47Q8C0E3 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.44□□□□□ -0.1
Trim47Q8C0E3 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms