Protein–RNA interactions for Protein: Q8BSI6

R3hcc1, R3H and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hcc1Q8BSI6 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
R3hcc1Q8BSI6 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
R3hcc1Q8BSI6 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
R3hcc1Q8BSI6 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
R3hcc1Q8BSI6 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
R3hcc1Q8BSI6 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
R3hcc1Q8BSI6 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
R3hcc1Q8BSI6 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.21■□□□□ 0.03
R3hcc1Q8BSI6 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
R3hcc1Q8BSI6 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
R3hcc1Q8BSI6 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
R3hcc1Q8BSI6 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.21■□□□□ 0.03
R3hcc1Q8BSI6 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
R3hcc1Q8BSI6 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
R3hcc1Q8BSI6 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
R3hcc1Q8BSI6 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
R3hcc1Q8BSI6 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
R3hcc1Q8BSI6 Gm42550-201ENSMUST00000201553 960 ntBASIC15.21■□□□□ 0.03
R3hcc1Q8BSI6 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
R3hcc1Q8BSI6 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
R3hcc1Q8BSI6 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
R3hcc1Q8BSI6 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
R3hcc1Q8BSI6 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
R3hcc1Q8BSI6 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
R3hcc1Q8BSI6 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
R3hcc1Q8BSI6 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
R3hcc1Q8BSI6 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
R3hcc1Q8BSI6 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Gm15487-201ENSMUST00000122373 465 ntBASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Mir6956-201ENSMUST00000183598 62 ntBASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Mir8102-201ENSMUST00000184148 139 ntBASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Gm28760-201ENSMUST00000185995 736 ntBASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Gm29667-201ENSMUST00000190817 490 ntBASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
R3hcc1Q8BSI6 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
R3hcc1Q8BSI6 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
R3hcc1Q8BSI6 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
R3hcc1Q8BSI6 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
R3hcc1Q8BSI6 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
R3hcc1Q8BSI6 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
R3hcc1Q8BSI6 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
R3hcc1Q8BSI6 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
R3hcc1Q8BSI6 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
R3hcc1Q8BSI6 Gm7114-201ENSMUST00000190159 1789 ntBASIC15.19■□□□□ 0.02
R3hcc1Q8BSI6 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
R3hcc1Q8BSI6 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
R3hcc1Q8BSI6 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
R3hcc1Q8BSI6 AC125108.1-201ENSMUST00000218986 2330 ntBASIC15.19■□□□□ 0.02
R3hcc1Q8BSI6 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
R3hcc1Q8BSI6 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
R3hcc1Q8BSI6 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
R3hcc1Q8BSI6 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC15.19■□□□□ 0.02
R3hcc1Q8BSI6 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
R3hcc1Q8BSI6 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.19■□□□□ 0.02
R3hcc1Q8BSI6 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
R3hcc1Q8BSI6 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
R3hcc1Q8BSI6 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
R3hcc1Q8BSI6 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
R3hcc1Q8BSI6 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC15.19■□□□□ 0.02
R3hcc1Q8BSI6 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
R3hcc1Q8BSI6 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC15.19■□□□□ 0.02
R3hcc1Q8BSI6 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
R3hcc1Q8BSI6 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.18■□□□□ 0.02
R3hcc1Q8BSI6 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
R3hcc1Q8BSI6 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
R3hcc1Q8BSI6 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
R3hcc1Q8BSI6 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
R3hcc1Q8BSI6 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC15.18■□□□□ 0.02
R3hcc1Q8BSI6 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
R3hcc1Q8BSI6 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
R3hcc1Q8BSI6 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms