Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 Gm4993-201ENSMUST00000118719 1174 ntBASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 Gm15432-201ENSMUST00000121106 195 ntBASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 H2-Q3-201ENSMUST00000172583 608 ntBASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC16.78■□□□□ 0.28
Col16a1Q8BLX7 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col16a1Q8BLX7 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col16a1Q8BLX7 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col16a1Q8BLX7 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Col16a1Q8BLX7 Gm5732-201ENSMUST00000182596 1007 ntBASIC16.77■□□□□ 0.28
Col16a1Q8BLX7 Gm9230-201ENSMUST00000188228 532 ntBASIC16.77■□□□□ 0.28
Col16a1Q8BLX7 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Col16a1Q8BLX7 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col16a1Q8BLX7 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col16a1Q8BLX7 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col16a1Q8BLX7 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col16a1Q8BLX7 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col16a1Q8BLX7 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Col16a1Q8BLX7 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Col16a1Q8BLX7 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col16a1Q8BLX7 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Col16a1Q8BLX7 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col16a1Q8BLX7 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col16a1Q8BLX7 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Col16a1Q8BLX7 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC16.77■□□□□ 0.27
Col16a1Q8BLX7 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Col16a1Q8BLX7 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col16a1Q8BLX7 Gm7851-201ENSMUST00000117574 323 ntBASIC16.77■□□□□ 0.27
Col16a1Q8BLX7 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Col16a1Q8BLX7 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Col16a1Q8BLX7 CT009713.8-201ENSMUST00000225448 560 ntBASIC16.77■□□□□ 0.27
Col16a1Q8BLX7 Gm6781-201ENSMUST00000038304 1242 ntBASIC16.77■□□□□ 0.27
Col16a1Q8BLX7 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col16a1Q8BLX7 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Col16a1Q8BLX7 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC16.77■□□□□ 0.27
Col16a1Q8BLX7 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Col16a1Q8BLX7 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Col16a1Q8BLX7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Col16a1Q8BLX7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
Col16a1Q8BLX7 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col16a1Q8BLX7 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col16a1Q8BLX7 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col16a1Q8BLX7 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.76■□□□□ 0.27
Col16a1Q8BLX7 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col16a1Q8BLX7 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col16a1Q8BLX7 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col16a1Q8BLX7 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Col16a1Q8BLX7 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col16a1Q8BLX7 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col16a1Q8BLX7 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col16a1Q8BLX7 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col16a1Q8BLX7 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col16a1Q8BLX7 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Col16a1Q8BLX7 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC16.76■□□□□ 0.27
Col16a1Q8BLX7 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC16.76■□□□□ 0.27
Col16a1Q8BLX7 Gm43962-201ENSMUST00000203898 190 ntBASIC16.76■□□□□ 0.27
Col16a1Q8BLX7 Gm7600-201ENSMUST00000209657 785 ntBASIC16.76■□□□□ 0.27
Col16a1Q8BLX7 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC16.76■□□□□ 0.27
Col16a1Q8BLX7 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Col16a1Q8BLX7 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col16a1Q8BLX7 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Col16a1Q8BLX7 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Col16a1Q8BLX7 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col16a1Q8BLX7 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col16a1Q8BLX7 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC16.76■□□□□ 0.27
Col16a1Q8BLX7 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col16a1Q8BLX7 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col16a1Q8BLX7 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col16a1Q8BLX7 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Gm6580-201ENSMUST00000117504 1357 ntBASIC16.75■□□□□ 0.27
Col16a1Q8BLX7 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms