Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Usp54Q8BL06 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
Usp54Q8BL06 AC123619.2-202ENSMUST00000225097 1568 ntBASIC18.21■□□□□ 0.5
Usp54Q8BL06 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Usp54Q8BL06 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp54Q8BL06 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp54Q8BL06 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Usp54Q8BL06 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Usp54Q8BL06 Gm42769-201ENSMUST00000198576 1659 ntBASIC18.2■□□□□ 0.5
Usp54Q8BL06 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp54Q8BL06 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp54Q8BL06 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp54Q8BL06 Gm44401-201ENSMUST00000204462 2375 ntBASIC18.2■□□□□ 0.5
Usp54Q8BL06 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Usp54Q8BL06 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp54Q8BL06 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp54Q8BL06 Gm9062-201ENSMUST00000117712 727 ntBASIC18.2■□□□□ 0.5
Usp54Q8BL06 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC18.2■□□□□ 0.5
Usp54Q8BL06 Gm8566-201ENSMUST00000120174 465 ntBASIC18.2■□□□□ 0.5
Usp54Q8BL06 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Usp54Q8BL06 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Usp54Q8BL06 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Usp54Q8BL06 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Usp54Q8BL06 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Usp54Q8BL06 AC159819.2-201ENSMUST00000216151 342 ntBASIC18.2■□□□□ 0.5
Usp54Q8BL06 Olfr1347-205ENSMUST00000220413 964 ntBASIC18.2■□□□□ 0.5
Usp54Q8BL06 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Usp54Q8BL06 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Usp54Q8BL06 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Usp54Q8BL06 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp54Q8BL06 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp54Q8BL06 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp54Q8BL06 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp54Q8BL06 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp54Q8BL06 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp54Q8BL06 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp54Q8BL06 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp54Q8BL06 AC166491.1-201ENSMUST00000227053 2308 ntBASIC18.19■□□□□ 0.5
Usp54Q8BL06 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp54Q8BL06 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp54Q8BL06 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp54Q8BL06 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp54Q8BL06 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp54Q8BL06 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp54Q8BL06 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Usp54Q8BL06 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC18.19■□□□□ 0.5
Usp54Q8BL06 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC18.19■□□□□ 0.5
Usp54Q8BL06 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC18.19■□□□□ 0.5
Usp54Q8BL06 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC18.19■□□□□ 0.5
Usp54Q8BL06 Gm8617-201ENSMUST00000118796 2222 ntBASIC18.19■□□□□ 0.5
Usp54Q8BL06 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Usp54Q8BL06 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp54Q8BL06 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp54Q8BL06 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp54Q8BL06 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp54Q8BL06 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Usp54Q8BL06 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp54Q8BL06 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC18.19■□□□□ 0.5
Usp54Q8BL06 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp54Q8BL06 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp54Q8BL06 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp54Q8BL06 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp54Q8BL06 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp54Q8BL06 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC18.18■□□□□ 0.5
Usp54Q8BL06 Gm7851-201ENSMUST00000117574 323 ntBASIC18.18■□□□□ 0.5
Usp54Q8BL06 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC18.18■□□□□ 0.5
Usp54Q8BL06 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Usp54Q8BL06 Gm19459-201ENSMUST00000176240 835 ntBASIC18.18■□□□□ 0.5
Usp54Q8BL06 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp54Q8BL06 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC18.18■□□□□ 0.5
Usp54Q8BL06 AC141438.2-201ENSMUST00000215068 271 ntBASIC18.18■□□□□ 0.5
Usp54Q8BL06 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC18.18■□□□□ 0.5
Usp54Q8BL06 CT009713.8-201ENSMUST00000225448 560 ntBASIC18.18■□□□□ 0.5
Usp54Q8BL06 AC135114.1-201ENSMUST00000228682 270 ntBASIC18.18■□□□□ 0.5
Usp54Q8BL06 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp54Q8BL06 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp54Q8BL06 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp54Q8BL06 Gm45342-201ENSMUST00000210903 1363 ntBASIC18.18■□□□□ 0.5
Usp54Q8BL06 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Usp54Q8BL06 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Usp54Q8BL06 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp54Q8BL06 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp54Q8BL06 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp54Q8BL06 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp54Q8BL06 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp54Q8BL06 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC18.18■□□□□ 0.5
Usp54Q8BL06 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp54Q8BL06 Gm12196-201ENSMUST00000120954 262 ntBASIC18.17■□□□□ 0.5
Usp54Q8BL06 AC154849.4-201ENSMUST00000224868 365 ntBASIC18.17■□□□□ 0.5
Usp54Q8BL06 Gm10179-201ENSMUST00000086233 688 ntBASIC18.17■□□□□ 0.5
Usp54Q8BL06 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp54Q8BL06 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC18.17■□□□□ 0.5
Usp54Q8BL06 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp54Q8BL06 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp54Q8BL06 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp54Q8BL06 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Usp54Q8BL06 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Usp54Q8BL06 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp54Q8BL06 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp54Q8BL06 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms