Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc40Q8BI79 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc40Q8BI79 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc40Q8BI79 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc40Q8BI79 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc40Q8BI79 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc40Q8BI79 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc40Q8BI79 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc40Q8BI79 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc40Q8BI79 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc40Q8BI79 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Syt7-205ENSMUST00000224135 1557 ntBASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc40Q8BI79 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc40Q8BI79 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc40Q8BI79 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc40Q8BI79 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc40Q8BI79 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc40Q8BI79 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
Ccdc40Q8BI79 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ccdc40Q8BI79 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc40Q8BI79 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc40Q8BI79 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc40Q8BI79 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc40Q8BI79 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.65□□□□□ -0.22
Ccdc40Q8BI79 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Ccdc40Q8BI79 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.65□□□□□ -0.22
Ccdc40Q8BI79 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.65□□□□□ -0.22
Ccdc40Q8BI79 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc40Q8BI79 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc40Q8BI79 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc40Q8BI79 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc40Q8BI79 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc40Q8BI79 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc40Q8BI79 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc40Q8BI79 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc40Q8BI79 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc40Q8BI79 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc40Q8BI79 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc40Q8BI79 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Gm7488-201ENSMUST00000117148 684 ntBASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Gm38223-201ENSMUST00000194484 695 ntBASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Gm42550-201ENSMUST00000201553 960 ntBASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.64□□□□□ -0.23
Ccdc40Q8BI79 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms