Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.07■□□□□ 0
Prpf40bQ80W14 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.07■□□□□ 0
Prpf40bQ80W14 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.07■□□□□ 0
Prpf40bQ80W14 Gm7293-201ENSMUST00000216682 1007 ntBASIC15.07■□□□□ 0
Prpf40bQ80W14 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC15.07■□□□□ 0
Prpf40bQ80W14 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf40bQ80W14 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf40bQ80W14 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf40bQ80W14 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.07■□□□□ 0
Prpf40bQ80W14 Gm26315-201ENSMUST00000083890 321 ntBASIC15.07■□□□□ 0
Prpf40bQ80W14 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf40bQ80W14 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC15.07■□□□□ 0
Prpf40bQ80W14 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf40bQ80W14 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf40bQ80W14 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf40bQ80W14 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC15.07■□□□□ 0
Prpf40bQ80W14 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Prpf40bQ80W14 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Prpf40bQ80W14 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC15.07■□□□□ 0
Prpf40bQ80W14 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC15.07■□□□□ 0
Prpf40bQ80W14 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Prpf40bQ80W14 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf40bQ80W14 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf40bQ80W14 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.07■□□□□ 0
Prpf40bQ80W14 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf40bQ80W14 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf40bQ80W14 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf40bQ80W14 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf40bQ80W14 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf40bQ80W14 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.06■□□□□ 0
Prpf40bQ80W14 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf40bQ80W14 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC15.06■□□□□ 0
Prpf40bQ80W14 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.06■□□□□ 0
Prpf40bQ80W14 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf40bQ80W14 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf40bQ80W14 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf40bQ80W14 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.06■□□□□ 0
Prpf40bQ80W14 Mir698-201ENSMUST00000102164 109 ntBASIC15.06■□□□□ 0
Prpf40bQ80W14 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Prpf40bQ80W14 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC15.06■□□□□ 0
Prpf40bQ80W14 Mospd4-201ENSMUST00000180618 576 ntBASIC15.06■□□□□ 0
Prpf40bQ80W14 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC15.06■□□□□ 0
Prpf40bQ80W14 Gm42997-202ENSMUST00000200321 985 ntBASIC15.06■□□□□ 0
Prpf40bQ80W14 Abhd11os-203ENSMUST00000222613 363 ntBASIC15.06■□□□□ 0
Prpf40bQ80W14 AC122371.3-201ENSMUST00000223402 1061 ntBASIC15.06■□□□□ 0
Prpf40bQ80W14 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf40bQ80W14 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf40bQ80W14 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf40bQ80W14 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf40bQ80W14 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf40bQ80W14 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf40bQ80W14 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Prpf40bQ80W14 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf40bQ80W14 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC15.06■□□□□ 0
Prpf40bQ80W14 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.06■□□□□ 0
Prpf40bQ80W14 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.06■□□□□ 0
Prpf40bQ80W14 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf40bQ80W14 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf40bQ80W14 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Prpf40bQ80W14 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Prpf40bQ80W14 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Prpf40bQ80W14 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Prpf40bQ80W14 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC15.05■□□□□ -0
Prpf40bQ80W14 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC15.05■□□□□ -0
Prpf40bQ80W14 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC15.05■□□□□ -0
Prpf40bQ80W14 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf40bQ80W14 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC15.05■□□□□ -0
Prpf40bQ80W14 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC15.05■□□□□ -0
Prpf40bQ80W14 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Prpf40bQ80W14 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf40bQ80W14 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf40bQ80W14 n-R5s195-201ENSMUST00000082891 119 ntBASIC15.05■□□□□ -0
Prpf40bQ80W14 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC15.05■□□□□ -0
Prpf40bQ80W14 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC15.05■□□□□ -0
Prpf40bQ80W14 Gm9755-201ENSMUST00000032981 1356 ntBASIC15.05■□□□□ -0
Prpf40bQ80W14 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf40bQ80W14 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf40bQ80W14 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Prpf40bQ80W14 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.05■□□□□ -0
Prpf40bQ80W14 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf40bQ80W14 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf40bQ80W14 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.05■□□□□ -0
Prpf40bQ80W14 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.05■□□□□ -0
Prpf40bQ80W14 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf40bQ80W14 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC15.05■□□□□ -0
Prpf40bQ80W14 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.05■□□□□ -0
Prpf40bQ80W14 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf40bQ80W14 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
Prpf40bQ80W14 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf40bQ80W14 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Prpf40bQ80W14 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf40bQ80W14 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf40bQ80W14 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf40bQ80W14 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.04■□□□□ -0
Prpf40bQ80W14 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.04■□□□□ -0
Prpf40bQ80W14 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.04■□□□□ -0
Prpf40bQ80W14 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf40bQ80W14 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf40bQ80W14 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Prpf40bQ80W14 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms