Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp8Q80U87 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp8Q80U87 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Usp8Q80U87 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp8Q80U87 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp8Q80U87 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp8Q80U87 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp8Q80U87 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp8Q80U87 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Usp8Q80U87 Gm15376-201ENSMUST00000122258 783 ntBASIC13.11□□□□□ -0.31
Usp8Q80U87 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp8Q80U87 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.11□□□□□ -0.31
Usp8Q80U87 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Usp8Q80U87 Gm26464-201ENSMUST00000157094 305 ntBASIC13.11□□□□□ -0.31
Usp8Q80U87 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Usp8Q80U87 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.11□□□□□ -0.31
Usp8Q80U87 Gm38144-201ENSMUST00000192790 465 ntBASIC13.11□□□□□ -0.31
Usp8Q80U87 Gm43094-201ENSMUST00000196549 921 ntBASIC13.11□□□□□ -0.31
Usp8Q80U87 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.11□□□□□ -0.31
Usp8Q80U87 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.11□□□□□ -0.31
Usp8Q80U87 Gm19078-201ENSMUST00000206311 727 ntBASIC13.11□□□□□ -0.31
Usp8Q80U87 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.11□□□□□ -0.31
Usp8Q80U87 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.11□□□□□ -0.31
Usp8Q80U87 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.11□□□□□ -0.31
Usp8Q80U87 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp8Q80U87 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp8Q80U87 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp8Q80U87 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Usp8Q80U87 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp8Q80U87 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp8Q80U87 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp8Q80U87 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp8Q80U87 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp8Q80U87 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp8Q80U87 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Usp8Q80U87 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Usp8Q80U87 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.11□□□□□ -0.31
Usp8Q80U87 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.1□□□□□ -0.31
Usp8Q80U87 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp8Q80U87 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp8Q80U87 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp8Q80U87 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Usp8Q80U87 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp8Q80U87 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Usp8Q80U87 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Usp8Q80U87 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp8Q80U87 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp8Q80U87 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Usp8Q80U87 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.1□□□□□ -0.31
Usp8Q80U87 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Usp8Q80U87 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp8Q80U87 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp8Q80U87 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp8Q80U87 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp8Q80U87 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.1□□□□□ -0.31
Usp8Q80U87 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Usp8Q80U87 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Usp8Q80U87 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
Usp8Q80U87 Gm14057-201ENSMUST00000120631 482 ntBASIC13.1□□□□□ -0.31
Usp8Q80U87 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.1□□□□□ -0.31
Usp8Q80U87 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Usp8Q80U87 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.1□□□□□ -0.31
Usp8Q80U87 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.1□□□□□ -0.31
Usp8Q80U87 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.1□□□□□ -0.31
Usp8Q80U87 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp8Q80U87 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Usp8Q80U87 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp8Q80U87 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp8Q80U87 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp8Q80U87 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Usp8Q80U87 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp8Q80U87 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp8Q80U87 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Usp8Q80U87 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Usp8Q80U87 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.1□□□□□ -0.31
Usp8Q80U87 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp8Q80U87 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp8Q80U87 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Usp8Q80U87 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp8Q80U87 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Usp8Q80U87 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Usp8Q80U87 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp8Q80U87 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Usp8Q80U87 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp8Q80U87 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp8Q80U87 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp8Q80U87 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.09□□□□□ -0.31
Usp8Q80U87 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Usp8Q80U87 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.09□□□□□ -0.31
Usp8Q80U87 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp8Q80U87 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp8Q80U87 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.09□□□□□ -0.31
Usp8Q80U87 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Usp8Q80U87 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp8Q80U87 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Usp8Q80U87 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.09□□□□□ -0.31
Usp8Q80U87 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Usp8Q80U87 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.09□□□□□ -0.31
Usp8Q80U87 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.09□□□□□ -0.31
Usp8Q80U87 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms