Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Gm15198-201ENSMUST00000117283 177 ntBASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Mir7221-201ENSMUST00000184009 72 ntBASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Gm43133-201ENSMUST00000197472 463 ntBASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Gm43179-201ENSMUST00000198797 275 ntBASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Gm19931-201ENSMUST00000198920 368 ntBASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdh19Q80TF3 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 Gm22018-201ENSMUST00000104357 131 ntBASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 Gm37042-201ENSMUST00000193816 581 ntBASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 Gm19309-201ENSMUST00000218295 205 ntBASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 Gm9823-201ENSMUST00000051212 327 ntBASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh19Q80TF3 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms