Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ush1gQ80T11 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Gm11637-201ENSMUST00000120601 592 ntBASIC14.28□□□□□ -0.12
Ush1gQ80T11 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.28□□□□□ -0.12
Ush1gQ80T11 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Gm21769-201ENSMUST00000211922 111 ntBASIC14.28□□□□□ -0.12
Ush1gQ80T11 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush1gQ80T11 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ush1gQ80T11 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ush1gQ80T11 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ush1gQ80T11 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.27□□□□□ -0.12
Ush1gQ80T11 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ush1gQ80T11 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ush1gQ80T11 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.27□□□□□ -0.12
Ush1gQ80T11 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.27□□□□□ -0.12
Ush1gQ80T11 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ush1gQ80T11 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.27□□□□□ -0.12
Ush1gQ80T11 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ush1gQ80T11 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ush1gQ80T11 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ush1gQ80T11 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ush1gQ80T11 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ush1gQ80T11 Gm11591-201ENSMUST00000120063 702 ntBASIC14.27□□□□□ -0.13
Ush1gQ80T11 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC14.27□□□□□ -0.13
Ush1gQ80T11 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.27□□□□□ -0.13
Ush1gQ80T11 Mir5132-201ENSMUST00000175166 71 ntBASIC14.27□□□□□ -0.13
Ush1gQ80T11 Gm6222-202ENSMUST00000182143 629 ntBASIC14.27□□□□□ -0.13
Ush1gQ80T11 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC14.27□□□□□ -0.13
Ush1gQ80T11 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ush1gQ80T11 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ush1gQ80T11 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ush1gQ80T11 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ush1gQ80T11 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ush1gQ80T11 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ush1gQ80T11 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Ush1gQ80T11 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.27□□□□□ -0.13
Ush1gQ80T11 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ush1gQ80T11 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.27□□□□□ -0.13
Ush1gQ80T11 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ush1gQ80T11 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ush1gQ80T11 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ush1gQ80T11 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ush1gQ80T11 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ush1gQ80T11 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ush1gQ80T11 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ush1gQ80T11 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ush1gQ80T11 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ush1gQ80T11 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ush1gQ80T11 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ush1gQ80T11 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ush1gQ80T11 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ush1gQ80T11 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ush1gQ80T11 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ush1gQ80T11 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ush1gQ80T11 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ush1gQ80T11 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ush1gQ80T11 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.26□□□□□ -0.13
Ush1gQ80T11 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.26□□□□□ -0.13
Ush1gQ80T11 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.26□□□□□ -0.13
Ush1gQ80T11 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ush1gQ80T11 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms