Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf38bQ80SY5 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.71□□□□□ -0.21
Prpf38bQ80SY5 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.71□□□□□ -0.21
Prpf38bQ80SY5 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.71□□□□□ -0.21
Prpf38bQ80SY5 Gm19208-201ENSMUST00000213861 912 ntBASIC13.71□□□□□ -0.21
Prpf38bQ80SY5 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf38bQ80SY5 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf38bQ80SY5 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Prpf38bQ80SY5 Gm10268-201ENSMUST00000085340 555 ntBASIC13.71□□□□□ -0.21
Prpf38bQ80SY5 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf38bQ80SY5 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf38bQ80SY5 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf38bQ80SY5 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf38bQ80SY5 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf38bQ80SY5 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf38bQ80SY5 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf38bQ80SY5 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Prpf38bQ80SY5 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Prpf38bQ80SY5 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Prpf38bQ80SY5 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Prpf38bQ80SY5 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Prpf38bQ80SY5 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Prpf38bQ80SY5 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.71□□□□□ -0.22
Prpf38bQ80SY5 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Prpf38bQ80SY5 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Prpf38bQ80SY5 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Prpf38bQ80SY5 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Prpf38bQ80SY5 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Prpf38bQ80SY5 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.71□□□□□ -0.22
Prpf38bQ80SY5 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Gm12203-201ENSMUST00000118235 598 ntBASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Gm12209-201ENSMUST00000120089 596 ntBASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Mir5120-201ENSMUST00000175020 78 ntBASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Gm29741-201ENSMUST00000192667 421 ntBASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Gm6621-201ENSMUST00000193251 772 ntBASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prpf38bQ80SY5 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Gm13297-201ENSMUST00000120205 934 ntBASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Gm25116-201ENSMUST00000157191 122 ntBASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms