Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85bQ6PDY0 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85bQ6PDY0 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.6□□□□□ -0.23
Ccdc85bQ6PDY0 Gm5070-201ENSMUST00000177599 862 ntBASIC13.6□□□□□ -0.23
Ccdc85bQ6PDY0 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.6□□□□□ -0.23
Ccdc85bQ6PDY0 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC13.6□□□□□ -0.23
Ccdc85bQ6PDY0 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.6□□□□□ -0.23
Ccdc85bQ6PDY0 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85bQ6PDY0 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85bQ6PDY0 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85bQ6PDY0 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85bQ6PDY0 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ccdc85bQ6PDY0 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc85bQ6PDY0 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc85bQ6PDY0 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc85bQ6PDY0 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85bQ6PDY0 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.6□□□□□ -0.23
Ccdc85bQ6PDY0 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc85bQ6PDY0 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.6□□□□□ -0.23
Ccdc85bQ6PDY0 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85bQ6PDY0 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc85bQ6PDY0 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
Ccdc85bQ6PDY0 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.6□□□□□ -0.23
Ccdc85bQ6PDY0 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Gm44405-201ENSMUST00000198952 126 ntBASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc85bQ6PDY0 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ccdc85bQ6PDY0 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
Ccdc85bQ6PDY0 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ccdc85bQ6PDY0 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.58□□□□□ -0.23
Ccdc85bQ6PDY0 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Ccdc85bQ6PDY0 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Ccdc85bQ6PDY0 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Ccdc85bQ6PDY0 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 Gm13047-201ENSMUST00000117116 815 ntBASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 Gm14109-201ENSMUST00000118814 309 ntBASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 Gm17208-201ENSMUST00000168388 535 ntBASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc85bQ6PDY0 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms