Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcc2Q6PDG5 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 AC173210.1-201ENSMUST00000222341 1131 ntBASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcc2Q6PDG5 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Gm12390-201ENSMUST00000117897 397 ntBASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Gm44064-201ENSMUST00000204964 1087 ntBASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcc2Q6PDG5 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Smarcc2Q6PDG5 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcc2Q6PDG5 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcc2Q6PDG5 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Smarcc2Q6PDG5 Gm42863-201ENSMUST00000197875 2958 ntBASIC15.21■□□□□ 0.03
Smarcc2Q6PDG5 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcc2Q6PDG5 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcc2Q6PDG5 AC114008.2-201ENSMUST00000227699 1347 ntBASIC15.21■□□□□ 0.03
Smarcc2Q6PDG5 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcc2Q6PDG5 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcc2Q6PDG5 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcc2Q6PDG5 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcc2Q6PDG5 Gm38355-201ENSMUST00000192514 1570 ntBASIC15.21■□□□□ 0.03
Smarcc2Q6PDG5 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcc2Q6PDG5 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcc2Q6PDG5 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcc2Q6PDG5 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Smarcc2Q6PDG5 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Smarcc2Q6PDG5 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.21■□□□□ 0.03
Smarcc2Q6PDG5 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.21■□□□□ 0.03
Smarcc2Q6PDG5 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.21■□□□□ 0.03
Smarcc2Q6PDG5 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcc2Q6PDG5 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Smarcc2Q6PDG5 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcc2Q6PDG5 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcc2Q6PDG5 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms