Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Casc4Q6P2L7 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Casc4Q6P2L7 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Casc4Q6P2L7 Gm14350-201ENSMUST00000116642 640 ntBASIC13.24□□□□□ -0.29
Casc4Q6P2L7 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Casc4Q6P2L7 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.24□□□□□ -0.29
Casc4Q6P2L7 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Casc4Q6P2L7 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.24□□□□□ -0.29
Casc4Q6P2L7 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.24□□□□□ -0.29
Casc4Q6P2L7 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.24□□□□□ -0.29
Casc4Q6P2L7 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.24□□□□□ -0.29
Casc4Q6P2L7 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.24□□□□□ -0.29
Casc4Q6P2L7 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.24□□□□□ -0.29
Casc4Q6P2L7 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.24□□□□□ -0.29
Casc4Q6P2L7 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.24□□□□□ -0.29
Casc4Q6P2L7 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.24□□□□□ -0.29
Casc4Q6P2L7 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.24□□□□□ -0.29
Casc4Q6P2L7 Gm8598-201ENSMUST00000221184 836 ntBASIC13.24□□□□□ -0.29
Casc4Q6P2L7 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.24□□□□□ -0.29
Casc4Q6P2L7 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Casc4Q6P2L7 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Casc4Q6P2L7 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Casc4Q6P2L7 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Casc4Q6P2L7 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Casc4Q6P2L7 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Casc4Q6P2L7 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Casc4Q6P2L7 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Casc4Q6P2L7 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Gm8213-201ENSMUST00000118191 441 ntBASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Casc4Q6P2L7 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Casc4Q6P2L7 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Casc4Q6P2L7 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Casc4Q6P2L7 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Casc4Q6P2L7 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.22□□□□□ -0.29
Casc4Q6P2L7 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Casc4Q6P2L7 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Casc4Q6P2L7 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Casc4Q6P2L7 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.22□□□□□ -0.29
Casc4Q6P2L7 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Casc4Q6P2L7 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Casc4Q6P2L7 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Casc4Q6P2L7 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Casc4Q6P2L7 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Casc4Q6P2L7 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Casc4Q6P2L7 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Casc4Q6P2L7 Gm4984-201ENSMUST00000115987 360 ntBASIC13.22□□□□□ -0.29
Casc4Q6P2L7 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Casc4Q6P2L7 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.22□□□□□ -0.29
Casc4Q6P2L7 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.22□□□□□ -0.29
Casc4Q6P2L7 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Casc4Q6P2L7 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Casc4Q6P2L7 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Casc4Q6P2L7 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Casc4Q6P2L7 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Casc4Q6P2L7 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.22□□□□□ -0.29
Casc4Q6P2L7 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Casc4Q6P2L7 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.22□□□□□ -0.29
Casc4Q6P2L7 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms