Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SspnQ62147 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SspnQ62147 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SspnQ62147 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SspnQ62147 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SspnQ62147 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.97□□□□□ -0.65
SspnQ62147 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC10.97□□□□□ -0.65
SspnQ62147 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.97□□□□□ -0.65
SspnQ62147 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SspnQ62147 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
SspnQ62147 Gm44891-201ENSMUST00000208817 2223 ntBASIC10.97□□□□□ -0.65
SspnQ62147 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SspnQ62147 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SspnQ62147 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
SspnQ62147 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SspnQ62147 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
SspnQ62147 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SspnQ62147 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
SspnQ62147 AC117194.1-201ENSMUST00000224847 3002 ntBASIC10.97□□□□□ -0.65
SspnQ62147 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.97□□□□□ -0.65
SspnQ62147 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SspnQ62147 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SspnQ62147 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
SspnQ62147 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SspnQ62147 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
SspnQ62147 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
SspnQ62147 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
SspnQ62147 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
SspnQ62147 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.65
SspnQ62147 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
SspnQ62147 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SspnQ62147 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
SspnQ62147 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SspnQ62147 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SspnQ62147 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SspnQ62147 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SspnQ62147 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
SspnQ62147 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SspnQ62147 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
SspnQ62147 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SspnQ62147 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
SspnQ62147 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
SspnQ62147 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SspnQ62147 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SspnQ62147 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
SspnQ62147 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
SspnQ62147 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SspnQ62147 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SspnQ62147 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.96□□□□□ -0.65
SspnQ62147 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SspnQ62147 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
SspnQ62147 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
SspnQ62147 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
SspnQ62147 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
SspnQ62147 Gm11524-201ENSMUST00000119349 807 ntBASIC10.96□□□□□ -0.65
SspnQ62147 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
SspnQ62147 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.96□□□□□ -0.65
SspnQ62147 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SspnQ62147 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SspnQ62147 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC10.96□□□□□ -0.65
SspnQ62147 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
SspnQ62147 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
SspnQ62147 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SspnQ62147 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SspnQ62147 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
SspnQ62147 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SspnQ62147 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SspnQ62147 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
SspnQ62147 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SspnQ62147 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
SspnQ62147 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SspnQ62147 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SspnQ62147 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
SspnQ62147 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.96□□□□□ -0.66
SspnQ62147 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
SspnQ62147 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.66
SspnQ62147 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.96□□□□□ -0.66
SspnQ62147 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.96□□□□□ -0.66
SspnQ62147 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SspnQ62147 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SspnQ62147 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SspnQ62147 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
SspnQ62147 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SspnQ62147 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SspnQ62147 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
SspnQ62147 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SspnQ62147 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SspnQ62147 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SspnQ62147 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
SspnQ62147 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC10.95□□□□□ -0.66
SspnQ62147 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
SspnQ62147 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC10.95□□□□□ -0.66
SspnQ62147 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
SspnQ62147 Gm15376-201ENSMUST00000122258 783 ntBASIC10.95□□□□□ -0.66
SspnQ62147 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC10.95□□□□□ -0.66
SspnQ62147 Gm16215-201ENSMUST00000161990 637 ntBASIC10.95□□□□□ -0.66
SspnQ62147 Gm29608-201ENSMUST00000190444 463 ntBASIC10.95□□□□□ -0.66
SspnQ62147 Gm31326-201ENSMUST00000191856 1048 ntBASIC10.95□□□□□ -0.66
SspnQ62147 Gm19078-201ENSMUST00000206311 727 ntBASIC10.95□□□□□ -0.66
SspnQ62147 Gm20949-201ENSMUST00000206478 952 ntBASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms