Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VcanQ62059 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VcanQ62059 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
VcanQ62059 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
VcanQ62059 Mir8115-201ENSMUST00000184992 119 ntBASIC11.92□□□□□ -0.5
VcanQ62059 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC11.91□□□□□ -0.5
VcanQ62059 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VcanQ62059 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VcanQ62059 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VcanQ62059 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VcanQ62059 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
VcanQ62059 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VcanQ62059 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC11.91□□□□□ -0.5
VcanQ62059 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VcanQ62059 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
VcanQ62059 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.91□□□□□ -0.5
VcanQ62059 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VcanQ62059 Gm26989-201ENSMUST00000182608 749 ntBASIC11.91□□□□□ -0.5
VcanQ62059 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.91□□□□□ -0.5
VcanQ62059 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.91□□□□□ -0.5
VcanQ62059 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.91□□□□□ -0.5
VcanQ62059 Gm6855-201ENSMUST00000206307 790 ntBASIC11.91□□□□□ -0.5
VcanQ62059 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VcanQ62059 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.91□□□□□ -0.5
VcanQ62059 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VcanQ62059 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
VcanQ62059 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VcanQ62059 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VcanQ62059 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.91□□□□□ -0.5
VcanQ62059 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
VcanQ62059 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
VcanQ62059 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
VcanQ62059 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
VcanQ62059 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
VcanQ62059 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VcanQ62059 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.91□□□□□ -0.5
VcanQ62059 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.91□□□□□ -0.5
VcanQ62059 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
VcanQ62059 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC11.91□□□□□ -0.5
VcanQ62059 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC11.91□□□□□ -0.5
VcanQ62059 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.91□□□□□ -0.5
VcanQ62059 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.91□□□□□ -0.5
VcanQ62059 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VcanQ62059 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
VcanQ62059 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
VcanQ62059 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VcanQ62059 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VcanQ62059 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.91□□□□□ -0.5
VcanQ62059 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VcanQ62059 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
VcanQ62059 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VcanQ62059 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VcanQ62059 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VcanQ62059 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VcanQ62059 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.91□□□□□ -0.5
VcanQ62059 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.91□□□□□ -0.5
VcanQ62059 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
VcanQ62059 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VcanQ62059 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
VcanQ62059 Gm13286-201ENSMUST00000117750 537 ntBASIC11.9□□□□□ -0.5
VcanQ62059 Gng5-ps-201ENSMUST00000120931 205 ntBASIC11.9□□□□□ -0.5
VcanQ62059 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.9□□□□□ -0.5
VcanQ62059 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VcanQ62059 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC11.9□□□□□ -0.5
VcanQ62059 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
VcanQ62059 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VcanQ62059 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VcanQ62059 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VcanQ62059 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
VcanQ62059 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.9□□□□□ -0.5
VcanQ62059 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.9□□□□□ -0.5
VcanQ62059 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
VcanQ62059 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.9□□□□□ -0.5
VcanQ62059 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.9□□□□□ -0.5
VcanQ62059 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
VcanQ62059 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
VcanQ62059 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VcanQ62059 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VcanQ62059 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
VcanQ62059 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
VcanQ62059 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VcanQ62059 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VcanQ62059 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VcanQ62059 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VcanQ62059 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
VcanQ62059 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
VcanQ62059 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
VcanQ62059 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
VcanQ62059 Gm13736-201ENSMUST00000119272 253 ntBASIC11.9□□□□□ -0.51
VcanQ62059 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
VcanQ62059 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC11.9□□□□□ -0.51
VcanQ62059 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
VcanQ62059 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
VcanQ62059 Mir6973a-201ENSMUST00000183646 78 ntBASIC11.9□□□□□ -0.51
VcanQ62059 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.9□□□□□ -0.51
VcanQ62059 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.9□□□□□ -0.51
VcanQ62059 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
VcanQ62059 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VcanQ62059 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VcanQ62059 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms