Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Col12a1Q60847 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Col12a1Q60847 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col12a1Q60847 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col12a1Q60847 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC12.55□□□□□ -0.4
Col12a1Q60847 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col12a1Q60847 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col12a1Q60847 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col12a1Q60847 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.55□□□□□ -0.4
Col12a1Q60847 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC12.55□□□□□ -0.4
Col12a1Q60847 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.55□□□□□ -0.4
Col12a1Q60847 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.55□□□□□ -0.4
Col12a1Q60847 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.55□□□□□ -0.4
Col12a1Q60847 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC12.55□□□□□ -0.4
Col12a1Q60847 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.55□□□□□ -0.4
Col12a1Q60847 AC168279.1-201ENSMUST00000214611 382 ntBASIC12.55□□□□□ -0.4
Col12a1Q60847 Gm5455-201ENSMUST00000058710 715 ntBASIC12.55□□□□□ -0.4
Col12a1Q60847 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col12a1Q60847 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col12a1Q60847 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.54□□□□□ -0.4
Col12a1Q60847 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col12a1Q60847 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col12a1Q60847 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col12a1Q60847 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col12a1Q60847 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col12a1Q60847 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col12a1Q60847 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Col12a1Q60847 Mir7677-201ENSMUST00000184226 67 ntBASIC12.54□□□□□ -0.4
Col12a1Q60847 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.54□□□□□ -0.4
Col12a1Q60847 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC12.54□□□□□ -0.4
Col12a1Q60847 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.54□□□□□ -0.4
Col12a1Q60847 Gm40879-201ENSMUST00000220759 612 ntBASIC12.54□□□□□ -0.4
Col12a1Q60847 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col12a1Q60847 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.54□□□□□ -0.4
Col12a1Q60847 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col12a1Q60847 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col12a1Q60847 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Col12a1Q60847 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col12a1Q60847 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Col12a1Q60847 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col12a1Q60847 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col12a1Q60847 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Col12a1Q60847 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col12a1Q60847 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.54□□□□□ -0.4
Col12a1Q60847 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.54□□□□□ -0.4
Col12a1Q60847 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col12a1Q60847 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col12a1Q60847 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col12a1Q60847 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col12a1Q60847 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col12a1Q60847 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col12a1Q60847 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col12a1Q60847 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col12a1Q60847 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Col12a1Q60847 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.54□□□□□ -0.4
Col12a1Q60847 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col12a1Q60847 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col12a1Q60847 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col12a1Q60847 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.53□□□□□ -0.4
Col12a1Q60847 Gm3332-201ENSMUST00000189337 928 ntBASIC12.53□□□□□ -0.4
Col12a1Q60847 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col12a1Q60847 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Col12a1Q60847 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col12a1Q60847 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col12a1Q60847 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col12a1Q60847 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col12a1Q60847 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Col12a1Q60847 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.53□□□□□ -0.4
Col12a1Q60847 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col12a1Q60847 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col12a1Q60847 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col12a1Q60847 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col12a1Q60847 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col12a1Q60847 Gm15784-201ENSMUST00000120260 1462 ntBASIC12.53□□□□□ -0.4
Col12a1Q60847 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Col12a1Q60847 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col12a1Q60847 Ighv2-1-201ENSMUST00000170946 353 ntBASIC12.53□□□□□ -0.4
Col12a1Q60847 Gm18201-201ENSMUST00000174735 875 ntBASIC12.53□□□□□ -0.4
Col12a1Q60847 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.53□□□□□ -0.4
Col12a1Q60847 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col12a1Q60847 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.53□□□□□ -0.4
Col12a1Q60847 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col12a1Q60847 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col12a1Q60847 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col12a1Q60847 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col12a1Q60847 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Col12a1Q60847 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Col12a1Q60847 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col12a1Q60847 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col12a1Q60847 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col12a1Q60847 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col12a1Q60847 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col12a1Q60847 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col12a1Q60847 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Col12a1Q60847 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col12a1Q60847 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col12a1Q60847 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col12a1Q60847 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.53□□□□□ -0.4
Col12a1Q60847 Gm27910-201ENSMUST00000185004 107 ntBASIC12.53□□□□□ -0.4
Col12a1Q60847 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms