Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NfkbibQ60778 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NfkbibQ60778 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
NfkbibQ60778 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NfkbibQ60778 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NfkbibQ60778 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NfkbibQ60778 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.64■□□□□ 0.09
NfkbibQ60778 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NfkbibQ60778 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
NfkbibQ60778 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NfkbibQ60778 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NfkbibQ60778 Mir1247-201ENSMUST00000116706 82 ntBASIC15.64■□□□□ 0.09
NfkbibQ60778 Gm6023-201ENSMUST00000118217 606 ntBASIC15.64■□□□□ 0.09
NfkbibQ60778 Gm13813-201ENSMUST00000120998 787 ntBASIC15.64■□□□□ 0.09
NfkbibQ60778 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NfkbibQ60778 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC15.64■□□□□ 0.09
NfkbibQ60778 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
NfkbibQ60778 Mir8109-201ENSMUST00000184375 117 ntBASIC15.64■□□□□ 0.09
NfkbibQ60778 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC15.64■□□□□ 0.09
NfkbibQ60778 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC15.64■□□□□ 0.09
NfkbibQ60778 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NfkbibQ60778 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NfkbibQ60778 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NfkbibQ60778 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
NfkbibQ60778 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NfkbibQ60778 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NfkbibQ60778 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NfkbibQ60778 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NfkbibQ60778 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NfkbibQ60778 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NfkbibQ60778 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC15.63■□□□□ 0.09
NfkbibQ60778 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NfkbibQ60778 Gm18222-201ENSMUST00000202416 1387 ntBASIC15.63■□□□□ 0.09
NfkbibQ60778 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NfkbibQ60778 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NfkbibQ60778 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.63■□□□□ 0.09
NfkbibQ60778 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NfkbibQ60778 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NfkbibQ60778 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NfkbibQ60778 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NfkbibQ60778 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NfkbibQ60778 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NfkbibQ60778 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NfkbibQ60778 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC15.63■□□□□ 0.09
NfkbibQ60778 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC15.63■□□□□ 0.09
NfkbibQ60778 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
NfkbibQ60778 Gm6992-201ENSMUST00000217973 1607 ntBASIC15.63■□□□□ 0.09
NfkbibQ60778 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NfkbibQ60778 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
NfkbibQ60778 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
NfkbibQ60778 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NfkbibQ60778 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NfkbibQ60778 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
NfkbibQ60778 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NfkbibQ60778 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NfkbibQ60778 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NfkbibQ60778 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
NfkbibQ60778 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NfkbibQ60778 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
NfkbibQ60778 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC15.62■□□□□ 0.09
NfkbibQ60778 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NfkbibQ60778 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NfkbibQ60778 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NfkbibQ60778 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NfkbibQ60778 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NfkbibQ60778 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
NfkbibQ60778 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
NfkbibQ60778 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NfkbibQ60778 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
NfkbibQ60778 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
NfkbibQ60778 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NfkbibQ60778 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
NfkbibQ60778 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NfkbibQ60778 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC15.62■□□□□ 0.09
NfkbibQ60778 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NfkbibQ60778 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NfkbibQ60778 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NfkbibQ60778 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC15.62■□□□□ 0.09
NfkbibQ60778 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NfkbibQ60778 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
NfkbibQ60778 Gm29396-201ENSMUST00000185659 716 ntBASIC15.62■□□□□ 0.09
NfkbibQ60778 Gm6652-201ENSMUST00000186414 1070 ntBASIC15.62■□□□□ 0.09
NfkbibQ60778 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC15.62■□□□□ 0.09
NfkbibQ60778 Gm18916-201ENSMUST00000198264 1246 ntBASIC15.62■□□□□ 0.09
NfkbibQ60778 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NfkbibQ60778 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC15.62■□□□□ 0.09
NfkbibQ60778 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC15.62■□□□□ 0.09
NfkbibQ60778 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC15.62■□□□□ 0.09
NfkbibQ60778 Gm8227-201ENSMUST00000223306 571 ntBASIC15.62■□□□□ 0.09
NfkbibQ60778 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC15.62■□□□□ 0.09
NfkbibQ60778 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
NfkbibQ60778 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NfkbibQ60778 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NfkbibQ60778 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NfkbibQ60778 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NfkbibQ60778 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NfkbibQ60778 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NfkbibQ60778 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NfkbibQ60778 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NfkbibQ60778 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms