Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vps54Q5SPW0 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.65■□□□□ 0.1
Vps54Q5SPW0 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vps54Q5SPW0 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vps54Q5SPW0 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps54Q5SPW0 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps54Q5SPW0 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps54Q5SPW0 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.1
Vps54Q5SPW0 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC15.64■□□□□ 0.09
Vps54Q5SPW0 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Gm17420-201ENSMUST00000164753 153 ntBASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Gm22121-201ENSMUST00000175148 54 ntBASIC15.64■□□□□ 0.09
Vps54Q5SPW0 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Gm37008-201ENSMUST00000195712 319 ntBASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps54Q5SPW0 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vps54Q5SPW0 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Trav4d-2-201ENSMUST00000120914 335 ntBASIC15.63■□□□□ 0.09
Vps54Q5SPW0 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC15.63■□□□□ 0.09
Vps54Q5SPW0 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC15.63■□□□□ 0.09
Vps54Q5SPW0 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Gm19184-201ENSMUST00000196798 928 ntBASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Gm45880-201ENSMUST00000213041 853 ntBASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Gm17823-201ENSMUST00000217830 1006 ntBASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Gm10478-201ENSMUST00000084451 396 ntBASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps54Q5SPW0 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Gm43579-201ENSMUST00000202387 1307 ntBASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps54Q5SPW0 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC15.62■□□□□ 0.09
Vps54Q5SPW0 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Vps54Q5SPW0 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps54Q5SPW0 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vps54Q5SPW0 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps54Q5SPW0 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps54Q5SPW0 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps54Q5SPW0 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps54Q5SPW0 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps54Q5SPW0 Gm42693-201ENSMUST00000196779 631 ntBASIC15.62■□□□□ 0.09
Vps54Q5SPW0 Gm18054-201ENSMUST00000207539 555 ntBASIC15.62■□□□□ 0.09
Vps54Q5SPW0 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps54Q5SPW0 Gm9899-201ENSMUST00000065519 555 ntBASIC15.62■□□□□ 0.09
Vps54Q5SPW0 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps54Q5SPW0 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Vps54Q5SPW0 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Vps54Q5SPW0 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms