Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc88aQ5SNZ0 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ccdc88aQ5SNZ0 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc88aQ5SNZ0 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc88aQ5SNZ0 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.87□□□□□ -0.03
Ccdc88aQ5SNZ0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.87□□□□□ -0.03
Ccdc88aQ5SNZ0 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc88aQ5SNZ0 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc88aQ5SNZ0 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc88aQ5SNZ0 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc88aQ5SNZ0 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc88aQ5SNZ0 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc88aQ5SNZ0 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ccdc88aQ5SNZ0 Gm25214-201ENSMUST00000104573 129 ntBASIC14.87□□□□□ -0.03
Ccdc88aQ5SNZ0 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Ccdc88aQ5SNZ0 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.87□□□□□ -0.03
Ccdc88aQ5SNZ0 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.87□□□□□ -0.03
Ccdc88aQ5SNZ0 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc88aQ5SNZ0 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.87□□□□□ -0.03
Ccdc88aQ5SNZ0 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc88aQ5SNZ0 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.87□□□□□ -0.03
Ccdc88aQ5SNZ0 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc88aQ5SNZ0 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc88aQ5SNZ0 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc88aQ5SNZ0 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc88aQ5SNZ0 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc88aQ5SNZ0 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc88aQ5SNZ0 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc88aQ5SNZ0 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc88aQ5SNZ0 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc88aQ5SNZ0 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc88aQ5SNZ0 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ccdc88aQ5SNZ0 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc88aQ5SNZ0 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Gm44262-201ENSMUST00000204969 372 ntBASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Gm13316-201ENSMUST00000140537 691 ntBASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Gm8738-201ENSMUST00000172606 329 ntBASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Gm3096-201ENSMUST00000185770 364 ntBASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ccdc88aQ5SNZ0 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc88aQ5SNZ0 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc88aQ5SNZ0 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc88aQ5SNZ0 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc88aQ5SNZ0 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Ccdc88aQ5SNZ0 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc88aQ5SNZ0 Selenot-ps-201ENSMUST00000119098 593 ntBASIC14.85□□□□□ -0.03
Ccdc88aQ5SNZ0 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc88aQ5SNZ0 Mir1943-201ENSMUST00000158276 73 ntBASIC14.85□□□□□ -0.03
Ccdc88aQ5SNZ0 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Ccdc88aQ5SNZ0 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Ccdc88aQ5SNZ0 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.85□□□□□ -0.03
Ccdc88aQ5SNZ0 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
Ccdc88aQ5SNZ0 Gm8285-201ENSMUST00000208293 759 ntBASIC14.85□□□□□ -0.03
Ccdc88aQ5SNZ0 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC14.85□□□□□ -0.03
Ccdc88aQ5SNZ0 Gm9004-201ENSMUST00000218739 1222 ntBASIC14.85□□□□□ -0.03
Ccdc88aQ5SNZ0 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc88aQ5SNZ0 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc88aQ5SNZ0 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc88aQ5SNZ0 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ccdc88aQ5SNZ0 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.85□□□□□ -0.03
Ccdc88aQ5SNZ0 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Ccdc88aQ5SNZ0 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc88aQ5SNZ0 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc88aQ5SNZ0 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc88aQ5SNZ0 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc88aQ5SNZ0 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc88aQ5SNZ0 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.85□□□□□ -0.03
Ccdc88aQ5SNZ0 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms