Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Gm5912-201ENSMUST00000122282 1438 ntBASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Gm38297-201ENSMUST00000195122 1057 ntBASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Gm6458-201ENSMUST00000211573 635 ntBASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf20Q5DTM8 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf20Q5DTM8 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rnf20Q5DTM8 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf20Q5DTM8 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf20Q5DTM8 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf20Q5DTM8 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf20Q5DTM8 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Rnf20Q5DTM8 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf20Q5DTM8 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf20Q5DTM8 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC15.53■□□□□ 0.08
Rnf20Q5DTM8 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC15.53■□□□□ 0.08
Rnf20Q5DTM8 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf20Q5DTM8 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf20Q5DTM8 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf20Q5DTM8 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf20Q5DTM8 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf20Q5DTM8 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf20Q5DTM8 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf20Q5DTM8 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf20Q5DTM8 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Rnf20Q5DTM8 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf20Q5DTM8 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Rnf20Q5DTM8 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf20Q5DTM8 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf20Q5DTM8 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf20Q5DTM8 AC154747.3-201ENSMUST00000224471 3470 ntBASIC15.52■□□□□ 0.08
Rnf20Q5DTM8 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf20Q5DTM8 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Rnf20Q5DTM8 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf20Q5DTM8 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.52■□□□□ 0.08
Rnf20Q5DTM8 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf20Q5DTM8 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Rnf20Q5DTM8 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf20Q5DTM8 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf20Q5DTM8 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf20Q5DTM8 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC15.52■□□□□ 0.08
Rnf20Q5DTM8 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf20Q5DTM8 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf20Q5DTM8 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC15.52■□□□□ 0.08
Rnf20Q5DTM8 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.52■□□□□ 0.08
Rnf20Q5DTM8 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf20Q5DTM8 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf20Q5DTM8 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf20Q5DTM8 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf20Q5DTM8 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.52■□□□□ 0.07
Rnf20Q5DTM8 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf20Q5DTM8 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Rnf20Q5DTM8 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf20Q5DTM8 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Rnf20Q5DTM8 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf20Q5DTM8 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf20Q5DTM8 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf20Q5DTM8 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Rnf20Q5DTM8 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf20Q5DTM8 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf20Q5DTM8 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf20Q5DTM8 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf20Q5DTM8 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf20Q5DTM8 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf20Q5DTM8 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf20Q5DTM8 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms