Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa3Q3UPR0 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa3Q3UPR0 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa3Q3UPR0 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Shisa3Q3UPR0 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.31□□□□□ -0.6
Shisa3Q3UPR0 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa3Q3UPR0 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Shisa3Q3UPR0 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa3Q3UPR0 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Shisa3Q3UPR0 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa3Q3UPR0 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Shisa3Q3UPR0 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa3Q3UPR0 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa3Q3UPR0 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Shisa3Q3UPR0 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa3Q3UPR0 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa3Q3UPR0 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shisa3Q3UPR0 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Gm4875-201ENSMUST00000118257 786 ntBASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Gm43339-201ENSMUST00000200032 1606 ntBASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shisa3Q3UPR0 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Gm15770-201ENSMUST00000117498 584 ntBASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Gm15460-201ENSMUST00000118147 391 ntBASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 AC155266.1-201ENSMUST00000220762 904 ntBASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.29□□□□□ -0.6
Shisa3Q3UPR0 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms