Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Snx27Q3UHD6 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.09□□□□□ -0.15
Snx27Q3UHD6 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.09□□□□□ -0.15
Snx27Q3UHD6 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.09□□□□□ -0.15
Snx27Q3UHD6 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Snx27Q3UHD6 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC14.09□□□□□ -0.15
Snx27Q3UHD6 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Snx27Q3UHD6 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Snx27Q3UHD6 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Snx27Q3UHD6 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Snx27Q3UHD6 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Snx27Q3UHD6 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Snx27Q3UHD6 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Snx27Q3UHD6 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Snx27Q3UHD6 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Snx27Q3UHD6 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Snx27Q3UHD6 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Snx27Q3UHD6 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Snx27Q3UHD6 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Snx27Q3UHD6 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Snx27Q3UHD6 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.15
Snx27Q3UHD6 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Snx27Q3UHD6 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Snx27Q3UHD6 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Snx27Q3UHD6 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Snx27Q3UHD6 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Snx27Q3UHD6 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Snx27Q3UHD6 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Snx27Q3UHD6 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.08□□□□□ -0.16
Snx27Q3UHD6 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Snx27Q3UHD6 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.08□□□□□ -0.16
Snx27Q3UHD6 Gm12291-201ENSMUST00000121627 311 ntBASIC14.08□□□□□ -0.16
Snx27Q3UHD6 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.08□□□□□ -0.16
Snx27Q3UHD6 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Snx27Q3UHD6 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Snx27Q3UHD6 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.08□□□□□ -0.16
Snx27Q3UHD6 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.08□□□□□ -0.16
Snx27Q3UHD6 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Snx27Q3UHD6 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Snx27Q3UHD6 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Snx27Q3UHD6 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Snx27Q3UHD6 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Snx27Q3UHD6 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.08□□□□□ -0.16
Snx27Q3UHD6 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Snx27Q3UHD6 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.08□□□□□ -0.16
Snx27Q3UHD6 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.08□□□□□ -0.16
Snx27Q3UHD6 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Snx27Q3UHD6 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Snx27Q3UHD6 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Snx27Q3UHD6 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Snx27Q3UHD6 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Snx27Q3UHD6 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.07□□□□□ -0.16
Snx27Q3UHD6 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Gm23363-201ENSMUST00000175024 79 ntBASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Morn2-202ENSMUST00000227729 656 ntBASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snx27Q3UHD6 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Snx27Q3UHD6 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.06□□□□□ -0.16
Snx27Q3UHD6 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.06□□□□□ -0.16
Snx27Q3UHD6 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snx27Q3UHD6 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snx27Q3UHD6 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snx27Q3UHD6 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Snx27Q3UHD6 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snx27Q3UHD6 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms