Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Gm43548-201ENSMUST00000197139 2353 ntBASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Gm20414-201ENSMUST00000172918 646 ntBASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Gm14644-201ENSMUST00000116671 647 ntBASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Gm9507-202ENSMUST00000180157 654 ntBASIC11.9□□□□□ -0.5
Spg11Q3UHA3 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Gm26013-201ENSMUST00000104404 119 ntBASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Gm27910-201ENSMUST00000185004 107 ntBASIC11.9□□□□□ -0.5
Spg11Q3UHA3 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Gm45925-201ENSMUST00000218882 744 ntBASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Spg11Q3UHA3 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Spg11Q3UHA3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Spg11Q3UHA3 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Spg11Q3UHA3 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Spg11Q3UHA3 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Spg11Q3UHA3 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Spg11Q3UHA3 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Spg11Q3UHA3 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Spg11Q3UHA3 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms