Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Gm13315-201ENSMUST00000120376 991 ntBASIC15.27■□□□□ 0.04
Col5a2Q3U962 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col5a2Q3U962 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC15.27■□□□□ 0.04
Col5a2Q3U962 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC15.27■□□□□ 0.04
Col5a2Q3U962 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC15.27■□□□□ 0.04
Col5a2Q3U962 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Col5a2Q3U962 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC15.27■□□□□ 0.04
Col5a2Q3U962 AC159103.1-201ENSMUST00000228325 429 ntBASIC15.27■□□□□ 0.04
Col5a2Q3U962 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col5a2Q3U962 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col5a2Q3U962 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Col5a2Q3U962 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Col5a2Q3U962 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col5a2Q3U962 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col5a2Q3U962 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col5a2Q3U962 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col5a2Q3U962 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Col5a2Q3U962 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Col5a2Q3U962 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col5a2Q3U962 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col5a2Q3U962 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Col5a2Q3U962 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col5a2Q3U962 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.27■□□□□ 0.03
Col5a2Q3U962 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.27■□□□□ 0.03
Col5a2Q3U962 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Col5a2Q3U962 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Col5a2Q3U962 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col5a2Q3U962 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col5a2Q3U962 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col5a2Q3U962 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col5a2Q3U962 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col5a2Q3U962 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Col5a2Q3U962 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Col5a2Q3U962 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Col5a2Q3U962 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC15.27■□□□□ 0.03
Col5a2Q3U962 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC15.27■□□□□ 0.03
Col5a2Q3U962 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Col5a2Q3U962 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC15.27■□□□□ 0.03
Col5a2Q3U962 Gm5778-201ENSMUST00000171003 1072 ntBASIC15.27■□□□□ 0.03
Col5a2Q3U962 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col5a2Q3U962 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC15.27■□□□□ 0.03
Col5a2Q3U962 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC15.27■□□□□ 0.03
Col5a2Q3U962 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC15.27■□□□□ 0.03
Col5a2Q3U962 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col5a2Q3U962 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Col5a2Q3U962 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC15.27■□□□□ 0.03
Col5a2Q3U962 AC165260.3-202ENSMUST00000224550 1031 ntBASIC15.27■□□□□ 0.03
Col5a2Q3U962 Gm6781-201ENSMUST00000038304 1242 ntBASIC15.27■□□□□ 0.03
Col5a2Q3U962 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col5a2Q3U962 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Col5a2Q3U962 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col5a2Q3U962 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col5a2Q3U962 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col5a2Q3U962 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col5a2Q3U962 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col5a2Q3U962 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col5a2Q3U962 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col5a2Q3U962 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col5a2Q3U962 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col5a2Q3U962 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.26■□□□□ 0.03
Col5a2Q3U962 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC15.26■□□□□ 0.03
Col5a2Q3U962 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Col5a2Q3U962 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Col5a2Q3U962 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col5a2Q3U962 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col5a2Q3U962 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col5a2Q3U962 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col5a2Q3U962 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col5a2Q3U962 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col5a2Q3U962 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col5a2Q3U962 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col5a2Q3U962 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col5a2Q3U962 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col5a2Q3U962 Gm11675-201ENSMUST00000121873 832 ntBASIC15.26■□□□□ 0.03
Col5a2Q3U962 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC15.26■□□□□ 0.03
Col5a2Q3U962 Rmrp-201ENSMUST00000157463 271 ntBASIC15.26■□□□□ 0.03
Col5a2Q3U962 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC15.26■□□□□ 0.03
Col5a2Q3U962 Gm27627-201ENSMUST00000183644 150 ntBASIC15.26■□□□□ 0.03
Col5a2Q3U962 AL732506.1-201ENSMUST00000226420 281 ntBASIC15.26■□□□□ 0.03
Col5a2Q3U962 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col5a2Q3U962 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col5a2Q3U962 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col5a2Q3U962 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.26■□□□□ 0.03
Col5a2Q3U962 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col5a2Q3U962 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col5a2Q3U962 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col5a2Q3U962 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col5a2Q3U962 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col5a2Q3U962 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col5a2Q3U962 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col5a2Q3U962 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col5a2Q3U962 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Col5a2Q3U962 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col5a2Q3U962 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col5a2Q3U962 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Col5a2Q3U962 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Col5a2Q3U962 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
Col5a2Q3U962 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC15.25■□□□□ 0.03
Col5a2Q3U962 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col5a2Q3U962 Gm38210-201ENSMUST00000191944 809 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms