Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Khdc4Q3TCX3 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.44□□□□□ -0.42
Khdc4Q3TCX3 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Khdc4Q3TCX3 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Khdc4Q3TCX3 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Khdc4Q3TCX3 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Khdc4Q3TCX3 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Gm5687-201ENSMUST00000118252 640 ntBASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Gm1335-201ENSMUST00000121653 386 ntBASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Gm38144-201ENSMUST00000192790 465 ntBASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Khdc4Q3TCX3 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Gm18054-201ENSMUST00000207539 555 ntBASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Khdc4Q3TCX3 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Khdc4Q3TCX3 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.41□□□□□ -0.42
Khdc4Q3TCX3 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Khdc4Q3TCX3 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Khdc4Q3TCX3 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms