Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Chd8Q09XV5 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Chd8Q09XV5 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chd8Q09XV5 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Gm24891-201ENSMUST00000104391 136 ntBASIC11.57□□□□□ -0.56
Chd8Q09XV5 Gm14213-201ENSMUST00000119778 768 ntBASIC11.57□□□□□ -0.56
Chd8Q09XV5 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Gm8100-201ENSMUST00000182906 988 ntBASIC11.57□□□□□ -0.56
Chd8Q09XV5 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Gm9230-201ENSMUST00000188228 532 ntBASIC11.57□□□□□ -0.56
Chd8Q09XV5 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd8Q09XV5 AC136376.2-201ENSMUST00000228819 490 ntBASIC11.57□□□□□ -0.56
Chd8Q09XV5 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Chd8Q09XV5 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Gm6447-201ENSMUST00000118905 835 ntBASIC11.57□□□□□ -0.56
Chd8Q09XV5 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chd8Q09XV5 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC11.57□□□□□ -0.56
Chd8Q09XV5 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Gm9135-201ENSMUST00000182963 990 ntBASIC11.57□□□□□ -0.56
Chd8Q09XV5 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Gm16380-201ENSMUST00000077997 478 ntBASIC11.57□□□□□ -0.56
Chd8Q09XV5 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.57□□□□□ -0.56
Chd8Q09XV5 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chd8Q09XV5 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Gm8723-201ENSMUST00000166076 820 ntBASIC11.56□□□□□ -0.56
Chd8Q09XV5 Gm8701-201ENSMUST00000169259 874 ntBASIC11.56□□□□□ -0.56
Chd8Q09XV5 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.56□□□□□ -0.56
Chd8Q09XV5 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.56□□□□□ -0.56
Chd8Q09XV5 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Efs-202ENSMUST00000227037 2540 ntBASIC11.56□□□□□ -0.56
Chd8Q09XV5 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Chd8Q09XV5 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC11.56□□□□□ -0.56
Chd8Q09XV5 Gm11246-201ENSMUST00000120880 345 ntBASIC11.56□□□□□ -0.56
Chd8Q09XV5 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms