Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcr5Q04683 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcr5Q04683 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cxcr5Q04683 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcr5Q04683 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.42□□□□□ -0.42
Cxcr5Q04683 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.42□□□□□ -0.42
Cxcr5Q04683 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcr5Q04683 Gm27989-201ENSMUST00000184721 107 ntBASIC12.42□□□□□ -0.42
Cxcr5Q04683 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcr5Q04683 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.42□□□□□ -0.42
Cxcr5Q04683 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcr5Q04683 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcr5Q04683 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcr5Q04683 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
Cxcr5Q04683 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcr5Q04683 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcr5Q04683 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.42□□□□□ -0.42
Cxcr5Q04683 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcr5Q04683 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcr5Q04683 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Cxcr5Q04683 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcr5Q04683 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcr5Q04683 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcr5Q04683 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Gm15487-201ENSMUST00000122373 465 ntBASIC12.41□□□□□ -0.42
Cxcr5Q04683 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cxcr5Q04683 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.41□□□□□ -0.42
Cxcr5Q04683 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcr5Q04683 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.41□□□□□ -0.42
Cxcr5Q04683 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cxcr5Q04683 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcr5Q04683 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcr5Q04683 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcr5Q04683 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcr5Q04683 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcr5Q04683 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcr5Q04683 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cxcr5Q04683 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcr5Q04683 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Cxcr5Q04683 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Cxcr5Q04683 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.4□□□□□ -0.42
Cxcr5Q04683 Gm28760-201ENSMUST00000185995 736 ntBASIC12.4□□□□□ -0.42
Cxcr5Q04683 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcr5Q04683 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcr5Q04683 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.4□□□□□ -0.42
Cxcr5Q04683 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcr5Q04683 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cxcr5Q04683 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcr5Q04683 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Cxcr5Q04683 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcr5Q04683 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcr5Q04683 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cxcr5Q04683 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.4□□□□□ -0.42
Cxcr5Q04683 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cxcr5Q04683 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Cxcr5Q04683 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.4□□□□□ -0.43
Cxcr5Q04683 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.4□□□□□ -0.43
Cxcr5Q04683 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcr5Q04683 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcr5Q04683 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcr5Q04683 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcr5Q04683 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcr5Q04683 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Cxcr5Q04683 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.39□□□□□ -0.43
Cxcr5Q04683 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcr5Q04683 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms