Protein–RNA interactions for Protein: Q02576

Nhlh1, Helix-loop-helix protein 1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlh1Q02576 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Nhlh1Q02576 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nhlh1Q02576 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nhlh1Q02576 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nhlh1Q02576 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nhlh1Q02576 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nhlh1Q02576 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nhlh1Q02576 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nhlh1Q02576 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nhlh1Q02576 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlh1Q02576 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlh1Q02576 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlh1Q02576 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nhlh1Q02576 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlh1Q02576 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlh1Q02576 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlh1Q02576 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlh1Q02576 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlh1Q02576 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlh1Q02576 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlh1Q02576 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlh1Q02576 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlh1Q02576 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlh1Q02576 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlh1Q02576 Gm15881-201ENSMUST00000148792 942 ntBASIC12.92□□□□□ -0.34
Nhlh1Q02576 Gm5616-201ENSMUST00000165252 384 ntBASIC12.92□□□□□ -0.34
Nhlh1Q02576 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlh1Q02576 Gm8741-201ENSMUST00000174736 384 ntBASIC12.92□□□□□ -0.34
Nhlh1Q02576 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.92□□□□□ -0.34
Nhlh1Q02576 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.92□□□□□ -0.34
Nhlh1Q02576 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.92□□□□□ -0.34
Nhlh1Q02576 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.92□□□□□ -0.34
Nhlh1Q02576 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlh1Q02576 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlh1Q02576 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.92□□□□□ -0.34
Nhlh1Q02576 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlh1Q02576 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nhlh1Q02576 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Nhlh1Q02576 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlh1Q02576 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
Nhlh1Q02576 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Nhlh1Q02576 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nhlh1Q02576 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlh1Q02576 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.92□□□□□ -0.34
Nhlh1Q02576 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlh1Q02576 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlh1Q02576 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlh1Q02576 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlh1Q02576 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nhlh1Q02576 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Nhlh1Q02576 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Gm8018-201ENSMUST00000173536 789 ntBASIC12.91□□□□□ -0.34
Nhlh1Q02576 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Gm37028-201ENSMUST00000194276 107 ntBASIC12.91□□□□□ -0.34
Nhlh1Q02576 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nhlh1Q02576 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.91□□□□□ -0.34
Nhlh1Q02576 Gm9463-201ENSMUST00000206707 601 ntBASIC12.91□□□□□ -0.34
Nhlh1Q02576 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.91□□□□□ -0.34
Nhlh1Q02576 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Gm21811-201ENSMUST00000096485 930 ntBASIC12.91□□□□□ -0.34
Nhlh1Q02576 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlh1Q02576 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nhlh1Q02576 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms