Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a1Q00780 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a1Q00780 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a1Q00780 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Col8a1Q00780 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a1Q00780 Gm10434-201ENSMUST00000101158 471 ntBASIC11.15□□□□□ -0.62
Col8a1Q00780 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Col8a1Q00780 Gm12616-201ENSMUST00000118594 382 ntBASIC11.15□□□□□ -0.62
Col8a1Q00780 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.15□□□□□ -0.62
Col8a1Q00780 Gm15276-201ENSMUST00000145953 498 ntBASIC11.15□□□□□ -0.62
Col8a1Q00780 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a1Q00780 Gm24548-201ENSMUST00000158650 108 ntBASIC11.15□□□□□ -0.62
Col8a1Q00780 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Col8a1Q00780 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Col8a1Q00780 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a1Q00780 Gm12624-201ENSMUST00000177615 382 ntBASIC11.15□□□□□ -0.62
Col8a1Q00780 Gm12621-201ENSMUST00000177760 382 ntBASIC11.15□□□□□ -0.62
Col8a1Q00780 Gm12615-201ENSMUST00000177970 382 ntBASIC11.15□□□□□ -0.62
Col8a1Q00780 Gm12622-201ENSMUST00000177975 382 ntBASIC11.15□□□□□ -0.62
Col8a1Q00780 Gm12627-201ENSMUST00000178412 382 ntBASIC11.15□□□□□ -0.62
Col8a1Q00780 Gm12625-201ENSMUST00000179122 382 ntBASIC11.15□□□□□ -0.62
Col8a1Q00780 Gm12614-201ENSMUST00000179586 382 ntBASIC11.15□□□□□ -0.62
Col8a1Q00780 Gm12613-201ENSMUST00000180323 382 ntBASIC11.15□□□□□ -0.62
Col8a1Q00780 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.15□□□□□ -0.62
Col8a1Q00780 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC11.15□□□□□ -0.62
Col8a1Q00780 Gm44069-201ENSMUST00000204898 506 ntBASIC11.15□□□□□ -0.62
Col8a1Q00780 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.15□□□□□ -0.62
Col8a1Q00780 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.15□□□□□ -0.62
Col8a1Q00780 Gm13097-201ENSMUST00000210722 397 ntBASIC11.15□□□□□ -0.62
Col8a1Q00780 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11.15□□□□□ -0.62
Col8a1Q00780 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a1Q00780 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Col8a1Q00780 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a1Q00780 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Col8a1Q00780 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.15□□□□□ -0.62
Col8a1Q00780 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Col8a1Q00780 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a1Q00780 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.15□□□□□ -0.62
Col8a1Q00780 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.15□□□□□ -0.62
Col8a1Q00780 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.15□□□□□ -0.62
Col8a1Q00780 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a1Q00780 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a1Q00780 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.15□□□□□ -0.63
Col8a1Q00780 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.15□□□□□ -0.63
Col8a1Q00780 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.15□□□□□ -0.63
Col8a1Q00780 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Col8a1Q00780 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Col8a1Q00780 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Col8a1Q00780 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.63
Col8a1Q00780 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Col8a1Q00780 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a1Q00780 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Col8a1Q00780 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a1Q00780 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a1Q00780 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.14□□□□□ -0.63
Col8a1Q00780 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a1Q00780 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a1Q00780 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a1Q00780 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a1Q00780 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a1Q00780 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.14□□□□□ -0.63
Col8a1Q00780 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a1Q00780 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a1Q00780 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a1Q00780 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Col8a1Q00780 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a1Q00780 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Col8a1Q00780 Gm16202-201ENSMUST00000117532 544 ntBASIC11.14□□□□□ -0.63
Col8a1Q00780 Gm8566-201ENSMUST00000120174 465 ntBASIC11.14□□□□□ -0.63
Col8a1Q00780 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.14□□□□□ -0.63
Col8a1Q00780 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC11.14□□□□□ -0.63
Col8a1Q00780 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.14□□□□□ -0.63
Col8a1Q00780 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.14□□□□□ -0.63
Col8a1Q00780 Gm7467-201ENSMUST00000185173 652 ntBASIC11.14□□□□□ -0.63
Col8a1Q00780 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.14□□□□□ -0.63
Col8a1Q00780 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Col8a1Q00780 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.14□□□□□ -0.63
Col8a1Q00780 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.14□□□□□ -0.63
Col8a1Q00780 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a1Q00780 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.14□□□□□ -0.63
Col8a1Q00780 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Col8a1Q00780 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a1Q00780 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a1Q00780 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a1Q00780 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a1Q00780 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a1Q00780 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a1Q00780 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a1Q00780 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a1Q00780 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a1Q00780 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a1Q00780 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.14□□□□□ -0.63
Col8a1Q00780 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a1Q00780 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a1Q00780 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a1Q00780 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a1Q00780 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col8a1Q00780 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.13□□□□□ -0.63
Col8a1Q00780 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col8a1Q00780 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms