Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gabpb1Q00420 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gabpb1Q00420 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gabpb1Q00420 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gabpb1Q00420 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.25□□□□□ -0.29
Gabpb1Q00420 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gabpb1Q00420 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gabpb1Q00420 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.25□□□□□ -0.29
Gabpb1Q00420 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gabpb1Q00420 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gabpb1Q00420 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gabpb1Q00420 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gabpb1Q00420 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gabpb1Q00420 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Gabpb1Q00420 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gabpb1Q00420 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gabpb1Q00420 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Gabpb1Q00420 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Gabpb1Q00420 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gabpb1Q00420 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.25□□□□□ -0.29
Gabpb1Q00420 Gm23984-201ENSMUST00000157139 203 ntBASIC13.25□□□□□ -0.29
Gabpb1Q00420 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Gabpb1Q00420 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.25□□□□□ -0.29
Gabpb1Q00420 Gm38671-201ENSMUST00000200573 130 ntBASIC13.25□□□□□ -0.29
Gabpb1Q00420 Gm6458-201ENSMUST00000211573 635 ntBASIC13.25□□□□□ -0.29
Gabpb1Q00420 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.25□□□□□ -0.29
Gabpb1Q00420 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Gabpb1Q00420 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.25□□□□□ -0.29
Gabpb1Q00420 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.25□□□□□ -0.29
Gabpb1Q00420 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gabpb1Q00420 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gabpb1Q00420 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gabpb1Q00420 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.24□□□□□ -0.29
Gabpb1Q00420 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gabpb1Q00420 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.24□□□□□ -0.29
Gabpb1Q00420 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.24□□□□□ -0.29
Gabpb1Q00420 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gabpb1Q00420 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Gm7287-201ENSMUST00000205267 602 ntBASIC13.24□□□□□ -0.29
Gabpb1Q00420 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Gm6180-201ENSMUST00000065243 498 ntBASIC13.24□□□□□ -0.29
Gabpb1Q00420 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Gabpb1Q00420 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Gabpb1Q00420 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Gabpb1Q00420 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.23□□□□□ -0.29
Gabpb1Q00420 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gabpb1Q00420 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gabpb1Q00420 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gabpb1Q00420 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gabpb1Q00420 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gabpb1Q00420 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gabpb1Q00420 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Gabpb1Q00420 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gabpb1Q00420 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.23□□□□□ -0.29
Gabpb1Q00420 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gabpb1Q00420 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.23□□□□□ -0.29
Gabpb1Q00420 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gabpb1Q00420 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gabpb1Q00420 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Gabpb1Q00420 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gabpb1Q00420 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.23□□□□□ -0.29
Gabpb1Q00420 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gabpb1Q00420 Gm6745-201ENSMUST00000199216 526 ntBASIC13.23□□□□□ -0.29
Gabpb1Q00420 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gabpb1Q00420 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.23□□□□□ -0.29
Gabpb1Q00420 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gabpb1Q00420 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms