Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm44065-201ENSMUST00000203184 3527 ntBASIC16.29■□□□□ 0.2
Nkx2-3P97334 Gm5884-201ENSMUST00000036712 1479 ntBASIC16.29■□□□□ 0.2
Nkx2-3P97334 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Nkx2-3P97334 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-3P97334 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Nkx2-3P97334 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Nkx2-3P97334 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Nkx2-3P97334 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-3P97334 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-3P97334 Gm44891-201ENSMUST00000208817 2223 ntBASIC16.29■□□□□ 0.2
Nkx2-3P97334 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC16.29■□□□□ 0.2
Nkx2-3P97334 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-3P97334 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-3P97334 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC16.29■□□□□ 0.2
Nkx2-3P97334 Gm13315-201ENSMUST00000120376 991 ntBASIC16.29■□□□□ 0.2
Nkx2-3P97334 Gm13665-201ENSMUST00000120830 528 ntBASIC16.29■□□□□ 0.2
Nkx2-3P97334 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
Nkx2-3P97334 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-3P97334 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC16.29■□□□□ 0.2
Nkx2-3P97334 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC16.29■□□□□ 0.2
Nkx2-3P97334 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC16.29■□□□□ 0.2
Nkx2-3P97334 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-3P97334 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Nkx2-3P97334 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-3P97334 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-3P97334 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-3P97334 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-3P97334 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-3P97334 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Nkx2-3P97334 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Nkx2-3P97334 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-3P97334 Grk6-205ENSMUST00000224653 2976 ntBASIC16.29■□□□□ 0.2
Nkx2-3P97334 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-3P97334 Gm43908-201ENSMUST00000205074 1472 ntBASIC16.29■□□□□ 0.2
Nkx2-3P97334 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-3P97334 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-3P97334 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-3P97334 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-3P97334 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-3P97334 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-3P97334 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-3P97334 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-3P97334 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-3P97334 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC16.28■□□□□ 0.2
Nkx2-3P97334 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-3P97334 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Nkx2-3P97334 Gm13996-201ENSMUST00000118456 430 ntBASIC16.28■□□□□ 0.2
Nkx2-3P97334 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Nkx2-3P97334 Gm14277-201ENSMUST00000121195 360 ntBASIC16.28■□□□□ 0.2
Nkx2-3P97334 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-3P97334 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-3P97334 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC16.28■□□□□ 0.2
Nkx2-3P97334 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC16.28■□□□□ 0.2
Nkx2-3P97334 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-3P97334 Gm18558-201ENSMUST00000186253 1214 ntBASIC16.28■□□□□ 0.2
Nkx2-3P97334 Gm37201-201ENSMUST00000191845 523 ntBASIC16.28■□□□□ 0.2
Nkx2-3P97334 Gm8913-201ENSMUST00000209491 641 ntBASIC16.28■□□□□ 0.2
Nkx2-3P97334 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Nkx2-3P97334 Gzmn-202ENSMUST00000225535 989 ntBASIC16.28■□□□□ 0.2
Nkx2-3P97334 AC125209.1-201ENSMUST00000225812 766 ntBASIC16.28■□□□□ 0.2
Nkx2-3P97334 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC16.28■□□□□ 0.2
Nkx2-3P97334 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Nkx2-3P97334 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-3P97334 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-3P97334 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-3P97334 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-3P97334 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-3P97334 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-3P97334 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.28■□□□□ 0.2
Nkx2-3P97334 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-3P97334 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-3P97334 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx2-3P97334 Gm42769-201ENSMUST00000198576 1659 ntBASIC16.27■□□□□ 0.2
Nkx2-3P97334 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx2-3P97334 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx2-3P97334 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Nkx2-3P97334 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx2-3P97334 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx2-3P97334 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx2-3P97334 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Nkx2-3P97334 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Nkx2-3P97334 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC16.27■□□□□ 0.2
Nkx2-3P97334 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC16.27■□□□□ 0.2
Nkx2-3P97334 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx2-3P97334 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC16.27■□□□□ 0.2
Nkx2-3P97334 Gm26361-201ENSMUST00000158868 186 ntBASIC16.27■□□□□ 0.2
Nkx2-3P97334 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx2-3P97334 Mir6927-201ENSMUST00000184494 71 ntBASIC16.27■□□□□ 0.2
Nkx2-3P97334 Gm37666-201ENSMUST00000194110 866 ntBASIC16.27■□□□□ 0.2
Nkx2-3P97334 Gm45691-201ENSMUST00000206905 1120 ntBASIC16.27■□□□□ 0.2
Nkx2-3P97334 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx2-3P97334 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC16.27■□□□□ 0.2
Nkx2-3P97334 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx2-3P97334 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx2-3P97334 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC16.27■□□□□ 0.2
Nkx2-3P97334 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC16.27■□□□□ 0.19
Nkx2-3P97334 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Nkx2-3P97334 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nkx2-3P97334 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Nkx2-3P97334 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms