Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lsm5P62322 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lsm5P62322 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Lsm5P62322 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm5P62322 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm5P62322 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC10.84□□□□□ -0.67
Lsm5P62322 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm5P62322 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm5P62322 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.84□□□□□ -0.67
Lsm5P62322 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm5P62322 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm5P62322 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm5P62322 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC10.84□□□□□ -0.67
Lsm5P62322 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm5P62322 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.84□□□□□ -0.67
Lsm5P62322 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm5P62322 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.84□□□□□ -0.67
Lsm5P62322 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm5P62322 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Lsm5P62322 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm5P62322 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm5P62322 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Lsm5P62322 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm5P62322 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC10.84□□□□□ -0.67
Lsm5P62322 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC10.84□□□□□ -0.67
Lsm5P62322 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm5P62322 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC10.84□□□□□ -0.67
Lsm5P62322 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC10.84□□□□□ -0.67
Lsm5P62322 Gm2651-201ENSMUST00000203560 838 ntBASIC10.84□□□□□ -0.67
Lsm5P62322 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm5P62322 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC10.84□□□□□ -0.67
Lsm5P62322 Gm18049-201ENSMUST00000208909 581 ntBASIC10.84□□□□□ -0.67
Lsm5P62322 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm5P62322 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC10.84□□□□□ -0.67
Lsm5P62322 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm5P62322 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm5P62322 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm5P62322 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Lsm5P62322 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm5P62322 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm5P62322 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm5P62322 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm5P62322 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm5P62322 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC10.84□□□□□ -0.67
Lsm5P62322 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.84□□□□□ -0.67
Lsm5P62322 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm5P62322 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.84□□□□□ -0.67
Lsm5P62322 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm5P62322 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm5P62322 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Lsm5P62322 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm5P62322 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm5P62322 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.84□□□□□ -0.67
Lsm5P62322 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm5P62322 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.84□□□□□ -0.67
Lsm5P62322 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm5P62322 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm5P62322 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm5P62322 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Lsm5P62322 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.67
Lsm5P62322 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm5P62322 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.83□□□□□ -0.68
Lsm5P62322 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm5P62322 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.83□□□□□ -0.68
Lsm5P62322 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm5P62322 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm5P62322 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm5P62322 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm5P62322 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm5P62322 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm5P62322 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Lsm5P62322 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm5P62322 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm5P62322 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm5P62322 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Lsm5P62322 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm5P62322 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC10.83□□□□□ -0.68
Lsm5P62322 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm5P62322 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC10.83□□□□□ -0.68
Lsm5P62322 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC10.83□□□□□ -0.68
Lsm5P62322 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.83□□□□□ -0.68
Lsm5P62322 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Lsm5P62322 Gm21470-201ENSMUST00000187680 696 ntBASIC10.83□□□□□ -0.68
Lsm5P62322 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm5P62322 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm5P62322 Gm19931-201ENSMUST00000198920 368 ntBASIC10.83□□□□□ -0.68
Lsm5P62322 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm5P62322 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC10.83□□□□□ -0.68
Lsm5P62322 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC10.83□□□□□ -0.68
Lsm5P62322 Dupd1-202ENSMUST00000224735 548 ntBASIC10.83□□□□□ -0.68
Lsm5P62322 AC154806.6-201ENSMUST00000228192 202 ntBASIC10.83□□□□□ -0.68
Lsm5P62322 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Lsm5P62322 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm5P62322 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm5P62322 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm5P62322 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Lsm5P62322 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm5P62322 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm5P62322 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm5P62322 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms