Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.47□□□□□ -0.57
Lsm6P62313 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.47□□□□□ -0.57
Lsm6P62313 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm6P62313 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm6P62313 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Lsm6P62313 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm6P62313 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm6P62313 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm6P62313 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm6P62313 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.47□□□□□ -0.57
Lsm6P62313 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm6P62313 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Lsm6P62313 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm6P62313 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm6P62313 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.46□□□□□ -0.57
Lsm6P62313 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Lsm6P62313 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm6P62313 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Lsm6P62313 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm6P62313 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Lsm6P62313 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm6P62313 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm6P62313 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm6P62313 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm6P62313 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Lsm6P62313 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm6P62313 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.46□□□□□ -0.57
Lsm6P62313 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.46□□□□□ -0.57
Lsm6P62313 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm6P62313 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.46□□□□□ -0.57
Lsm6P62313 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm6P62313 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Lsm6P62313 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.46□□□□□ -0.57
Lsm6P62313 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.46□□□□□ -0.57
Lsm6P62313 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.46□□□□□ -0.57
Lsm6P62313 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.46□□□□□ -0.57
Lsm6P62313 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm6P62313 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.46□□□□□ -0.57
Lsm6P62313 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm6P62313 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm6P62313 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm6P62313 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.46□□□□□ -0.58
Lsm6P62313 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Lsm6P62313 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm6P62313 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm6P62313 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm6P62313 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.46□□□□□ -0.58
Lsm6P62313 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.46□□□□□ -0.58
Lsm6P62313 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.46□□□□□ -0.58
Lsm6P62313 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.58
Lsm6P62313 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm6P62313 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm6P62313 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm6P62313 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm6P62313 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm6P62313 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm6P62313 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm6P62313 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.45□□□□□ -0.58
Lsm6P62313 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Lsm6P62313 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm6P62313 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm6P62313 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm6P62313 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm6P62313 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Lsm6P62313 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm6P62313 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm6P62313 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm6P62313 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.45□□□□□ -0.58
Lsm6P62313 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm6P62313 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Lsm6P62313 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm6P62313 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm6P62313 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm6P62313 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm6P62313 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm6P62313 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Lsm6P62313 Gm13612-201ENSMUST00000119276 390 ntBASIC11.45□□□□□ -0.58
Lsm6P62313 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.45□□□□□ -0.58
Lsm6P62313 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm6P62313 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.45□□□□□ -0.58
Lsm6P62313 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.45□□□□□ -0.58
Lsm6P62313 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.45□□□□□ -0.58
Lsm6P62313 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.45□□□□□ -0.58
Lsm6P62313 Gm7287-201ENSMUST00000205267 602 ntBASIC11.45□□□□□ -0.58
Lsm6P62313 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm6P62313 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.45□□□□□ -0.58
Lsm6P62313 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.45□□□□□ -0.58
Lsm6P62313 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.45□□□□□ -0.58
Lsm6P62313 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.45□□□□□ -0.58
Lsm6P62313 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.45□□□□□ -0.58
Lsm6P62313 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm6P62313 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm6P62313 Gm6180-201ENSMUST00000065243 498 ntBASIC11.45□□□□□ -0.58
Lsm6P62313 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm6P62313 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm6P62313 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Lsm6P62313 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm6P62313 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.45□□□□□ -0.58
Lsm6P62313 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm6P62313 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms