Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ube2d3P61079 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ube2d3P61079 AC122314.1-201ENSMUST00000223056 2239 ntBASIC9.37□□□□□ -0.91
Ube2d3P61079 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC9.37□□□□□ -0.91
Ube2d3P61079 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ube2d3P61079 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC9.37□□□□□ -0.91
Ube2d3P61079 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ube2d3P61079 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Ube2d3P61079 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ube2d3P61079 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Ube2d3P61079 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC9.37□□□□□ -0.91
Ube2d3P61079 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ube2d3P61079 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ube2d3P61079 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
Ube2d3P61079 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Ube2d3P61079 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ube2d3P61079 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ube2d3P61079 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Ube2d3P61079 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Ube2d3P61079 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ube2d3P61079 AC137842.1-201ENSMUST00000227896 2064 ntBASIC9.37□□□□□ -0.91
Ube2d3P61079 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ube2d3P61079 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC9.37□□□□□ -0.91
Ube2d3P61079 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
Ube2d3P61079 Gm12537-201ENSMUST00000119266 1002 ntBASIC9.37□□□□□ -0.91
Ube2d3P61079 Gm12070-201ENSMUST00000119551 1002 ntBASIC9.37□□□□□ -0.91
Ube2d3P61079 Gm12485-201ENSMUST00000119641 291 ntBASIC9.37□□□□□ -0.91
Ube2d3P61079 Gm12671-201ENSMUST00000119978 1002 ntBASIC9.37□□□□□ -0.91
Ube2d3P61079 Gm13292-201ENSMUST00000120014 1000 ntBASIC9.37□□□□□ -0.91
Ube2d3P61079 Gm12403-201ENSMUST00000121384 959 ntBASIC9.37□□□□□ -0.91
Ube2d3P61079 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC9.37□□□□□ -0.91
Ube2d3P61079 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Ube2d3P61079 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Ube2d3P61079 Gm10359-201ENSMUST00000180167 1002 ntBASIC9.37□□□□□ -0.91
Ube2d3P61079 Gm12033-201ENSMUST00000180654 1002 ntBASIC9.37□□□□□ -0.91
Ube2d3P61079 Gm5559-201ENSMUST00000180755 1002 ntBASIC9.37□□□□□ -0.91
Ube2d3P61079 Gm4335-201ENSMUST00000182581 1004 ntBASIC9.37□□□□□ -0.91
Ube2d3P61079 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC9.37□□□□□ -0.91
Ube2d3P61079 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC9.37□□□□□ -0.91
Ube2d3P61079 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC9.37□□□□□ -0.91
Ube2d3P61079 AC139580.1-202ENSMUST00000223574 928 ntBASIC9.37□□□□□ -0.91
Ube2d3P61079 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ube2d3P61079 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ube2d3P61079 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Ube2d3P61079 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ube2d3P61079 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ube2d3P61079 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Ube2d3P61079 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ube2d3P61079 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ube2d3P61079 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ube2d3P61079 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ube2d3P61079 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ube2d3P61079 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Ube2d3P61079 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Ube2d3P61079 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ube2d3P61079 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ube2d3P61079 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ube2d3P61079 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube2d3P61079 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube2d3P61079 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
Ube2d3P61079 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Ube2d3P61079 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube2d3P61079 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube2d3P61079 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube2d3P61079 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Ube2d3P61079 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube2d3P61079 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube2d3P61079 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
Ube2d3P61079 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC9.36□□□□□ -0.91
Ube2d3P61079 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube2d3P61079 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube2d3P61079 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube2d3P61079 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube2d3P61079 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC9.36□□□□□ -0.91
Ube2d3P61079 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC9.36□□□□□ -0.91
Ube2d3P61079 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Ube2d3P61079 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC9.36□□□□□ -0.91
Ube2d3P61079 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Ube2d3P61079 Gm38144-201ENSMUST00000192790 465 ntBASIC9.36□□□□□ -0.91
Ube2d3P61079 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC9.36□□□□□ -0.91
Ube2d3P61079 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube2d3P61079 Gm17870-201ENSMUST00000219489 1174 ntBASIC9.36□□□□□ -0.91
Ube2d3P61079 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC9.36□□□□□ -0.91
Ube2d3P61079 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube2d3P61079 Gm20445-201ENSMUST00000061905 565 ntBASIC9.36□□□□□ -0.91
Ube2d3P61079 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Ube2d3P61079 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Ube2d3P61079 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube2d3P61079 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube2d3P61079 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube2d3P61079 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Ube2d3P61079 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube2d3P61079 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube2d3P61079 Gm5989-201ENSMUST00000096092 2077 ntBASIC9.36□□□□□ -0.91
Ube2d3P61079 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube2d3P61079 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube2d3P61079 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Ube2d3P61079 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ube2d3P61079 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Ube2d3P61079 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms