Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msh6P54276 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC16.42■□□□□ 0.22
Msh6P54276 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Msh6P54276 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Msh6P54276 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
Msh6P54276 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msh6P54276 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Msh6P54276 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msh6P54276 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC16.42■□□□□ 0.22
Msh6P54276 Gm14109-201ENSMUST00000118814 309 ntBASIC16.42■□□□□ 0.22
Msh6P54276 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC16.42■□□□□ 0.22
Msh6P54276 Gm22334-201ENSMUST00000158070 133 ntBASIC16.42■□□□□ 0.22
Msh6P54276 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msh6P54276 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msh6P54276 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC16.42■□□□□ 0.22
Msh6P54276 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC16.42■□□□□ 0.22
Msh6P54276 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC16.42■□□□□ 0.22
Msh6P54276 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Msh6P54276 Gm29787-201ENSMUST00000222129 849 ntBASIC16.42■□□□□ 0.22
Msh6P54276 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msh6P54276 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msh6P54276 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msh6P54276 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Msh6P54276 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Msh6P54276 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msh6P54276 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msh6P54276 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msh6P54276 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msh6P54276 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC16.42■□□□□ 0.22
Msh6P54276 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msh6P54276 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msh6P54276 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Msh6P54276 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msh6P54276 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Msh6P54276 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Msh6P54276 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Msh6P54276 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Msh6P54276 Gm15547-201ENSMUST00000122152 333 ntBASIC16.41■□□□□ 0.22
Msh6P54276 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Msh6P54276 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Msh6P54276 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Msh6P54276 Gm18916-201ENSMUST00000198264 1246 ntBASIC16.41■□□□□ 0.22
Msh6P54276 Gm42997-202ENSMUST00000200321 985 ntBASIC16.41■□□□□ 0.22
Msh6P54276 Gm43416-201ENSMUST00000201916 1015 ntBASIC16.41■□□□□ 0.22
Msh6P54276 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Msh6P54276 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Msh6P54276 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Msh6P54276 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Msh6P54276 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Msh6P54276 Gm5846-201ENSMUST00000193146 1414 ntBASIC16.41■□□□□ 0.22
Msh6P54276 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Msh6P54276 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Msh6P54276 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Msh6P54276 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Msh6P54276 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Msh6P54276 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Msh6P54276 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Msh6P54276 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC16.41■□□□□ 0.22
Msh6P54276 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Msh6P54276 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Msh6P54276 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh6P54276 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh6P54276 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Msh6P54276 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh6P54276 Gm5523-201ENSMUST00000180415 997 ntBASIC16.4■□□□□ 0.22
Msh6P54276 Gm27046-201ENSMUST00000182160 463 ntBASIC16.4■□□□□ 0.22
Msh6P54276 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC16.4■□□□□ 0.22
Msh6P54276 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Msh6P54276 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh6P54276 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh6P54276 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh6P54276 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Msh6P54276 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC16.4■□□□□ 0.22
Msh6P54276 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Msh6P54276 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh6P54276 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Msh6P54276 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh6P54276 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh6P54276 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh6P54276 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Msh6P54276 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Msh6P54276 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC16.4■□□□□ 0.22
Msh6P54276 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh6P54276 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh6P54276 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Msh6P54276 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Msh6P54276 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh6P54276 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC16.39■□□□□ 0.21
Msh6P54276 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh6P54276 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh6P54276 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh6P54276 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh6P54276 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh6P54276 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Msh6P54276 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Msh6P54276 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Msh6P54276 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Msh6P54276 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC16.39■□□□□ 0.21
Msh6P54276 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh6P54276 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms