Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RoraP51448 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
RoraP51448 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RoraP51448 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RoraP51448 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RoraP51448 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
RoraP51448 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RoraP51448 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
RoraP51448 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RoraP51448 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RoraP51448 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RoraP51448 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RoraP51448 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RoraP51448 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RoraP51448 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RoraP51448 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RoraP51448 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RoraP51448 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RoraP51448 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RoraP51448 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RoraP51448 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
RoraP51448 Gm8805-201ENSMUST00000117848 313 ntBASIC12.36□□□□□ -0.43
RoraP51448 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RoraP51448 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.36□□□□□ -0.43
RoraP51448 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.36□□□□□ -0.43
RoraP51448 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RoraP51448 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.36□□□□□ -0.43
RoraP51448 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.36□□□□□ -0.43
RoraP51448 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.36□□□□□ -0.43
RoraP51448 Gm43118-201ENSMUST00000199149 775 ntBASIC12.36□□□□□ -0.43
RoraP51448 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.36□□□□□ -0.43
RoraP51448 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RoraP51448 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
RoraP51448 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
RoraP51448 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RoraP51448 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RoraP51448 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
RoraP51448 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RoraP51448 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
RoraP51448 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RoraP51448 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RoraP51448 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
RoraP51448 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RoraP51448 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
RoraP51448 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RoraP51448 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RoraP51448 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RoraP51448 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
RoraP51448 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RoraP51448 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.35□□□□□ -0.43
RoraP51448 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RoraP51448 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RoraP51448 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RoraP51448 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
RoraP51448 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RoraP51448 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RoraP51448 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RoraP51448 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RoraP51448 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
RoraP51448 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RoraP51448 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RoraP51448 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.35□□□□□ -0.43
RoraP51448 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RoraP51448 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RoraP51448 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
RoraP51448 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RoraP51448 Mir874-201ENSMUST00000104769 76 ntBASIC12.35□□□□□ -0.43
RoraP51448 Gm11637-201ENSMUST00000120601 592 ntBASIC12.35□□□□□ -0.43
RoraP51448 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RoraP51448 Gm25261-201ENSMUST00000157416 134 ntBASIC12.35□□□□□ -0.43
RoraP51448 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.35□□□□□ -0.43
RoraP51448 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
RoraP51448 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.35□□□□□ -0.43
RoraP51448 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.35□□□□□ -0.43
RoraP51448 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.35□□□□□ -0.43
RoraP51448 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RoraP51448 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RoraP51448 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.35□□□□□ -0.43
RoraP51448 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
RoraP51448 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
RoraP51448 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RoraP51448 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RoraP51448 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RoraP51448 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RoraP51448 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RoraP51448 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
RoraP51448 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RoraP51448 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RoraP51448 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RoraP51448 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.35□□□□□ -0.43
RoraP51448 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RoraP51448 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.35□□□□□ -0.43
RoraP51448 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.35□□□□□ -0.43
RoraP51448 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.34□□□□□ -0.43
RoraP51448 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RoraP51448 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RoraP51448 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RoraP51448 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
RoraP51448 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RoraP51448 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms