Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SftpbP50405 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SftpbP50405 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SftpbP50405 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SftpbP50405 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SftpbP50405 Gm14719-201ENSMUST00000121891 340 ntBASIC13.35□□□□□ -0.27
SftpbP50405 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.35□□□□□ -0.27
SftpbP50405 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.35□□□□□ -0.27
SftpbP50405 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.35□□□□□ -0.27
SftpbP50405 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
SftpbP50405 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SftpbP50405 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SftpbP50405 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SftpbP50405 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SftpbP50405 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SftpbP50405 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SftpbP50405 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SftpbP50405 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SftpbP50405 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
SftpbP50405 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SftpbP50405 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SftpbP50405 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SftpbP50405 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SftpbP50405 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SftpbP50405 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SftpbP50405 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SftpbP50405 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SftpbP50405 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SftpbP50405 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SftpbP50405 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SftpbP50405 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SftpbP50405 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SftpbP50405 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SftpbP50405 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SftpbP50405 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SftpbP50405 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SftpbP50405 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SftpbP50405 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SftpbP50405 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SftpbP50405 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SftpbP50405 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SftpbP50405 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
SftpbP50405 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
SftpbP50405 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
SftpbP50405 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SftpbP50405 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SftpbP50405 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
SftpbP50405 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SftpbP50405 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SftpbP50405 Gm24694-201ENSMUST00000180054 110 ntBASIC13.34□□□□□ -0.27
SftpbP50405 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
SftpbP50405 Gm27663-201ENSMUST00000184839 110 ntBASIC13.34□□□□□ -0.27
SftpbP50405 Gm42550-201ENSMUST00000201553 960 ntBASIC13.34□□□□□ -0.27
SftpbP50405 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.34□□□□□ -0.27
SftpbP50405 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SftpbP50405 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SftpbP50405 Gm5867-201ENSMUST00000063197 592 ntBASIC13.34□□□□□ -0.27
SftpbP50405 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SftpbP50405 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.34□□□□□ -0.27
SftpbP50405 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
SftpbP50405 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SftpbP50405 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SftpbP50405 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SftpbP50405 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SftpbP50405 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.34□□□□□ -0.27
SftpbP50405 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SftpbP50405 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.34□□□□□ -0.27
SftpbP50405 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.34□□□□□ -0.27
SftpbP50405 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.34□□□□□ -0.27
SftpbP50405 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SftpbP50405 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.33□□□□□ -0.27
SftpbP50405 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SftpbP50405 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SftpbP50405 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SftpbP50405 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SftpbP50405 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.33□□□□□ -0.28
SftpbP50405 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SftpbP50405 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SftpbP50405 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SftpbP50405 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SftpbP50405 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SftpbP50405 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SftpbP50405 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SftpbP50405 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.33□□□□□ -0.28
SftpbP50405 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SftpbP50405 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SftpbP50405 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.33□□□□□ -0.28
SftpbP50405 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.33□□□□□ -0.28
SftpbP50405 Gm15321-201ENSMUST00000121290 288 ntBASIC13.33□□□□□ -0.28
SftpbP50405 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.33□□□□□ -0.28
SftpbP50405 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
SftpbP50405 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.33□□□□□ -0.28
SftpbP50405 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.33□□□□□ -0.28
SftpbP50405 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.33□□□□□ -0.28
SftpbP50405 Gm7730-201ENSMUST00000212486 454 ntBASIC13.33□□□□□ -0.28
SftpbP50405 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SftpbP50405 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.33□□□□□ -0.28
SftpbP50405 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.33□□□□□ -0.28
SftpbP50405 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SftpbP50405 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms