Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox18P43680 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox18P43680 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox18P43680 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox18P43680 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.61□□□□□ -0.39
Sox18P43680 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox18P43680 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.61□□□□□ -0.39
Sox18P43680 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox18P43680 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox18P43680 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.61□□□□□ -0.39
Sox18P43680 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox18P43680 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.61□□□□□ -0.39
Sox18P43680 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.61□□□□□ -0.39
Sox18P43680 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox18P43680 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox18P43680 Gm27023-201ENSMUST00000182372 285 ntBASIC12.61□□□□□ -0.39
Sox18P43680 Gm7467-201ENSMUST00000185173 652 ntBASIC12.61□□□□□ -0.39
Sox18P43680 Gm37533-201ENSMUST00000193848 545 ntBASIC12.61□□□□□ -0.39
Sox18P43680 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox18P43680 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.61□□□□□ -0.39
Sox18P43680 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.61□□□□□ -0.39
Sox18P43680 Gm19163-201ENSMUST00000223313 780 ntBASIC12.61□□□□□ -0.39
Sox18P43680 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox18P43680 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox18P43680 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Sox18P43680 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Sox18P43680 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox18P43680 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox18P43680 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox18P43680 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.61□□□□□ -0.39
Sox18P43680 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox18P43680 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Sox18P43680 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.61□□□□□ -0.39
Sox18P43680 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox18P43680 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox18P43680 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox18P43680 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox18P43680 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Sox18P43680 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox18P43680 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox18P43680 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox18P43680 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox18P43680 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.6□□□□□ -0.39
Sox18P43680 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Sox18P43680 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.6□□□□□ -0.39
Sox18P43680 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox18P43680 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox18P43680 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox18P43680 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox18P43680 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox18P43680 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.6□□□□□ -0.39
Sox18P43680 Gm16479-201ENSMUST00000121706 932 ntBASIC12.6□□□□□ -0.39
Sox18P43680 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox18P43680 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox18P43680 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox18P43680 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox18P43680 Ap1g1-206ENSMUST00000179104 1096 ntBASIC12.6□□□□□ -0.39
Sox18P43680 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox18P43680 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Sox18P43680 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.6□□□□□ -0.39
Sox18P43680 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC12.6□□□□□ -0.39
Sox18P43680 AC154616.1-201ENSMUST00000226995 804 ntBASIC12.6□□□□□ -0.39
Sox18P43680 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox18P43680 Vmn1r192-201ENSMUST00000072632 1067 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Sox18P43680 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sox18P43680 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox18P43680 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Sox18P43680 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox18P43680 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sox18P43680 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox18P43680 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sox18P43680 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox18P43680 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox18P43680 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox18P43680 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.6□□□□□ -0.39
Sox18P43680 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox18P43680 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox18P43680 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox18P43680 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox18P43680 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox18P43680 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.59□□□□□ -0.39
Sox18P43680 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox18P43680 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sox18P43680 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox18P43680 Gm43980-201ENSMUST00000204899 1612 ntBASIC12.59□□□□□ -0.39
Sox18P43680 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox18P43680 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sox18P43680 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox18P43680 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox18P43680 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox18P43680 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.59□□□□□ -0.39
Sox18P43680 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox18P43680 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.59□□□□□ -0.39
Sox18P43680 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox18P43680 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sox18P43680 Gm14579-201ENSMUST00000117068 283 ntBASIC12.59□□□□□ -0.39
Sox18P43680 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.59□□□□□ -0.39
Sox18P43680 Gm13665-201ENSMUST00000120830 528 ntBASIC12.59□□□□□ -0.39
Sox18P43680 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox18P43680 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms