Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl12P40224 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cxcl12P40224 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl12P40224 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl12P40224 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.36□□□□□ -0.27
Cxcl12P40224 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl12P40224 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.36□□□□□ -0.27
Cxcl12P40224 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl12P40224 Gm44999-201ENSMUST00000207456 1493 ntBASIC13.36□□□□□ -0.27
Cxcl12P40224 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl12P40224 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.35□□□□□ -0.27
Cxcl12P40224 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl12P40224 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cxcl12P40224 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.35□□□□□ -0.27
Cxcl12P40224 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl12P40224 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl12P40224 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl12P40224 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl12P40224 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.35□□□□□ -0.27
Cxcl12P40224 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl12P40224 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl12P40224 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl12P40224 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl12P40224 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.35□□□□□ -0.27
Cxcl12P40224 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC13.35□□□□□ -0.27
Cxcl12P40224 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.35□□□□□ -0.27
Cxcl12P40224 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl12P40224 Gm19353-201ENSMUST00000184561 445 ntBASIC13.35□□□□□ -0.27
Cxcl12P40224 Gm7600-201ENSMUST00000209657 785 ntBASIC13.35□□□□□ -0.27
Cxcl12P40224 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC13.35□□□□□ -0.27
Cxcl12P40224 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.35□□□□□ -0.27
Cxcl12P40224 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13.35□□□□□ -0.27
Cxcl12P40224 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl12P40224 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cxcl12P40224 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cxcl12P40224 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl12P40224 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.35□□□□□ -0.27
Cxcl12P40224 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl12P40224 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl12P40224 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl12P40224 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Cxcl12P40224 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl12P40224 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl12P40224 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl12P40224 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl12P40224 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl12P40224 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl12P40224 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl12P40224 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl12P40224 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl12P40224 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl12P40224 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cxcl12P40224 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl12P40224 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl12P40224 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl12P40224 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl12P40224 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl12P40224 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cxcl12P40224 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl12P40224 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Cxcl12P40224 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cxcl12P40224 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl12P40224 Gm12029-201ENSMUST00000120073 832 ntBASIC13.34□□□□□ -0.27
Cxcl12P40224 Gm14999-201ENSMUST00000121039 624 ntBASIC13.34□□□□□ -0.27
Cxcl12P40224 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl12P40224 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.34□□□□□ -0.27
Cxcl12P40224 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl12P40224 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.34□□□□□ -0.27
Cxcl12P40224 Gm28071-201ENSMUST00000190355 478 ntBASIC13.34□□□□□ -0.27
Cxcl12P40224 Gm8285-201ENSMUST00000208293 759 ntBASIC13.34□□□□□ -0.27
Cxcl12P40224 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.34□□□□□ -0.27
Cxcl12P40224 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl12P40224 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl12P40224 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl12P40224 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cxcl12P40224 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cxcl12P40224 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl12P40224 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl12P40224 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Cxcl12P40224 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl12P40224 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl12P40224 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Cxcl12P40224 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.34□□□□□ -0.27
Cxcl12P40224 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl12P40224 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl12P40224 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl12P40224 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl12P40224 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.34□□□□□ -0.27
Cxcl12P40224 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl12P40224 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Cxcl12P40224 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cxcl12P40224 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cxcl12P40224 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl12P40224 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl12P40224 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl12P40224 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl12P40224 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl12P40224 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl12P40224 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.33□□□□□ -0.28
Cxcl12P40224 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms