Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.03□□□□□ -0.48
Sftpa1P35242 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sftpa1P35242 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sftpa1P35242 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Sftpa1P35242 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sftpa1P35242 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sftpa1P35242 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sftpa1P35242 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sftpa1P35242 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.03□□□□□ -0.48
Sftpa1P35242 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sftpa1P35242 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.03□□□□□ -0.48
Sftpa1P35242 Gm14109-201ENSMUST00000118814 309 ntBASIC12.03□□□□□ -0.48
Sftpa1P35242 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.03□□□□□ -0.48
Sftpa1P35242 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.03□□□□□ -0.48
Sftpa1P35242 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.03□□□□□ -0.48
Sftpa1P35242 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.03□□□□□ -0.48
Sftpa1P35242 Gm44100-201ENSMUST00000204329 436 ntBASIC12.03□□□□□ -0.48
Sftpa1P35242 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sftpa1P35242 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.03□□□□□ -0.48
Sftpa1P35242 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.03□□□□□ -0.48
Sftpa1P35242 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.03□□□□□ -0.48
Sftpa1P35242 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.03□□□□□ -0.48
Sftpa1P35242 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sftpa1P35242 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sftpa1P35242 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sftpa1P35242 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sftpa1P35242 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sftpa1P35242 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sftpa1P35242 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.03□□□□□ -0.48
Sftpa1P35242 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sftpa1P35242 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sftpa1P35242 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sftpa1P35242 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sftpa1P35242 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sftpa1P35242 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sftpa1P35242 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sftpa1P35242 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sftpa1P35242 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sftpa1P35242 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.02□□□□□ -0.48
Sftpa1P35242 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.02□□□□□ -0.48
Sftpa1P35242 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.02□□□□□ -0.48
Sftpa1P35242 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sftpa1P35242 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.02□□□□□ -0.48
Sftpa1P35242 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sftpa1P35242 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sftpa1P35242 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sftpa1P35242 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sftpa1P35242 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.02□□□□□ -0.49
Sftpa1P35242 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sftpa1P35242 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sftpa1P35242 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.02□□□□□ -0.49
Sftpa1P35242 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.02□□□□□ -0.49
Sftpa1P35242 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.02□□□□□ -0.49
Sftpa1P35242 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Sftpa1P35242 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.02□□□□□ -0.49
Sftpa1P35242 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.02□□□□□ -0.49
Sftpa1P35242 Mir1943-201ENSMUST00000158276 73 ntBASIC12.02□□□□□ -0.49
Sftpa1P35242 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sftpa1P35242 Gm43378-201ENSMUST00000199336 582 ntBASIC12.02□□□□□ -0.49
Sftpa1P35242 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.02□□□□□ -0.49
Sftpa1P35242 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.02□□□□□ -0.49
Sftpa1P35242 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.02□□□□□ -0.49
Sftpa1P35242 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.02□□□□□ -0.49
Sftpa1P35242 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sftpa1P35242 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sftpa1P35242 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sftpa1P35242 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Sftpa1P35242 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sftpa1P35242 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.02□□□□□ -0.49
Sftpa1P35242 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Sftpa1P35242 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sftpa1P35242 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sftpa1P35242 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sftpa1P35242 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Sftpa1P35242 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Sftpa1P35242 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sftpa1P35242 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sftpa1P35242 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sftpa1P35242 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.02□□□□□ -0.49
Sftpa1P35242 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sftpa1P35242 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sftpa1P35242 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sftpa1P35242 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sftpa1P35242 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sftpa1P35242 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sftpa1P35242 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sftpa1P35242 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sftpa1P35242 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Sftpa1P35242 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Sftpa1P35242 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Sftpa1P35242 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sftpa1P35242 Gm14704-201ENSMUST00000120300 874 ntBASIC12.01□□□□□ -0.49
Sftpa1P35242 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sftpa1P35242 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sftpa1P35242 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sftpa1P35242 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sftpa1P35242 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sftpa1P35242 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Sftpa1P35242 Gm3096-201ENSMUST00000185770 364 ntBASIC12.01□□□□□ -0.49
Sftpa1P35242 Gm45224-201ENSMUST00000208203 414 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms