Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Slc6a1P31648 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Slc6a1P31648 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Slc6a1P31648 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Slc6a1P31648 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Slc6a1P31648 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Slc6a1P31648 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Slc6a1P31648 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.24□□□□□ -0.61
Slc6a1P31648 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a1P31648 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Slc6a1P31648 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Slc6a1P31648 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a1P31648 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a1P31648 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a1P31648 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a1P31648 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a1P31648 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a1P31648 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a1P31648 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a1P31648 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Slc6a1P31648 Mir698-201ENSMUST00000102164 109 ntBASIC11.23□□□□□ -0.61
Slc6a1P31648 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a1P31648 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.23□□□□□ -0.61
Slc6a1P31648 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.23□□□□□ -0.61
Slc6a1P31648 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Slc6a1P31648 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a1P31648 Gm44124-201ENSMUST00000204159 472 ntBASIC11.23□□□□□ -0.61
Slc6a1P31648 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a1P31648 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Slc6a1P31648 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a1P31648 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a1P31648 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Slc6a1P31648 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a1P31648 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a1P31648 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a1P31648 AC114543.1-201ENSMUST00000226451 1558 ntBASIC11.23□□□□□ -0.61
Slc6a1P31648 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a1P31648 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a1P31648 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.23□□□□□ -0.61
Slc6a1P31648 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a1P31648 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a1P31648 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.23□□□□□ -0.61
Slc6a1P31648 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a1P31648 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a1P31648 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a1P31648 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a1P31648 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.23□□□□□ -0.61
Slc6a1P31648 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a1P31648 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc6a1P31648 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc6a1P31648 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc6a1P31648 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc6a1P31648 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc6a1P31648 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc6a1P31648 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc6a1P31648 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc6a1P31648 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Slc6a1P31648 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc6a1P31648 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Slc6a1P31648 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Slc6a1P31648 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Slc6a1P31648 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc6a1P31648 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc6a1P31648 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Slc6a1P31648 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.22□□□□□ -0.61
Slc6a1P31648 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Slc6a1P31648 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc6a1P31648 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Slc6a1P31648 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc6a1P31648 Gm25927-201ENSMUST00000175058 117 ntBASIC11.22□□□□□ -0.61
Slc6a1P31648 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Slc6a1P31648 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Slc6a1P31648 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Slc6a1P31648 Mir7684-201ENSMUST00000183858 60 ntBASIC11.22□□□□□ -0.61
Slc6a1P31648 Mir8102-201ENSMUST00000184148 139 ntBASIC11.22□□□□□ -0.61
Slc6a1P31648 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Slc6a1P31648 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.22□□□□□ -0.61
Slc6a1P31648 Gm45841-201ENSMUST00000207700 164 ntBASIC11.22□□□□□ -0.61
Slc6a1P31648 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Slc6a1P31648 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc6a1P31648 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc6a1P31648 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Slc6a1P31648 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc6a1P31648 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc6a1P31648 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc6a1P31648 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc6a1P31648 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Slc6a1P31648 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc6a1P31648 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc6a1P31648 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Slc6a1P31648 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc6a1P31648 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc6a1P31648 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Slc6a1P31648 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc6a1P31648 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Slc6a1P31648 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Slc6a1P31648 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Slc6a1P31648 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Slc6a1P31648 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.21□□□□□ -0.61
Slc6a1P31648 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms