Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col2a1P28481 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.62□□□□□ -0.07
Col2a1P28481 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col2a1P28481 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col2a1P28481 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Col2a1P28481 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col2a1P28481 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col2a1P28481 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Col2a1P28481 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col2a1P28481 Gm14208-201ENSMUST00000119645 678 ntBASIC14.61□□□□□ -0.07
Col2a1P28481 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.61□□□□□ -0.07
Col2a1P28481 Gm45598-202ENSMUST00000210719 986 ntBASIC14.61□□□□□ -0.07
Col2a1P28481 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.61□□□□□ -0.07
Col2a1P28481 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.61□□□□□ -0.07
Col2a1P28481 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col2a1P28481 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col2a1P28481 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col2a1P28481 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.61□□□□□ -0.07
Col2a1P28481 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col2a1P28481 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col2a1P28481 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col2a1P28481 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col2a1P28481 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.6□□□□□ -0.07
Col2a1P28481 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col2a1P28481 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.6□□□□□ -0.07
Col2a1P28481 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.6□□□□□ -0.07
Col2a1P28481 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Col2a1P28481 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.6□□□□□ -0.07
Col2a1P28481 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col2a1P28481 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col2a1P28481 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col2a1P28481 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col2a1P28481 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col2a1P28481 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col2a1P28481 Gm13996-201ENSMUST00000118456 430 ntBASIC14.6□□□□□ -0.07
Col2a1P28481 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.6□□□□□ -0.07
Col2a1P28481 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Col2a1P28481 Gm25732-201ENSMUST00000175168 60 ntBASIC14.6□□□□□ -0.07
Col2a1P28481 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Col2a1P28481 Gm16505-201ENSMUST00000179981 232 ntBASIC14.6□□□□□ -0.07
Col2a1P28481 Gm8913-201ENSMUST00000209491 641 ntBASIC14.6□□□□□ -0.07
Col2a1P28481 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col2a1P28481 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col2a1P28481 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col2a1P28481 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col2a1P28481 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col2a1P28481 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col2a1P28481 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col2a1P28481 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col2a1P28481 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col2a1P28481 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col2a1P28481 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.59□□□□□ -0.07
Col2a1P28481 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col2a1P28481 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col2a1P28481 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Col2a1P28481 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col2a1P28481 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col2a1P28481 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.59□□□□□ -0.07
Col2a1P28481 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col2a1P28481 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.59□□□□□ -0.07
Col2a1P28481 Gm24231-201ENSMUST00000104315 133 ntBASIC14.59□□□□□ -0.07
Col2a1P28481 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.59□□□□□ -0.07
Col2a1P28481 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Col2a1P28481 Gm14644-201ENSMUST00000116671 647 ntBASIC14.59□□□□□ -0.07
Col2a1P28481 Gm14760-201ENSMUST00000121831 999 ntBASIC14.59□□□□□ -0.07
Col2a1P28481 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col2a1P28481 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.59□□□□□ -0.07
Col2a1P28481 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Col2a1P28481 Gm27341-201ENSMUST00000183570 106 ntBASIC14.59□□□□□ -0.07
Col2a1P28481 Gm32999-201ENSMUST00000192693 562 ntBASIC14.59□□□□□ -0.07
Col2a1P28481 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14.59□□□□□ -0.07
Col2a1P28481 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col2a1P28481 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Col2a1P28481 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.59□□□□□ -0.07
Col2a1P28481 Gzmn-202ENSMUST00000225535 989 ntBASIC14.59□□□□□ -0.07
Col2a1P28481 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col2a1P28481 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Col2a1P28481 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col2a1P28481 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col2a1P28481 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col2a1P28481 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col2a1P28481 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.59□□□□□ -0.07
Col2a1P28481 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col2a1P28481 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col2a1P28481 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.59□□□□□ -0.07
Col2a1P28481 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col2a1P28481 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col2a1P28481 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col2a1P28481 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Col2a1P28481 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col2a1P28481 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col2a1P28481 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.59□□□□□ -0.07
Col2a1P28481 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col2a1P28481 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.59□□□□□ -0.07
Col2a1P28481 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.59□□□□□ -0.07
Col2a1P28481 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col2a1P28481 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col2a1P28481 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col2a1P28481 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.59□□□□□ -0.07
Col2a1P28481 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms