Protein–RNA interactions for Protein: P24399

Znf239, Zinc finger protein 239, mousemouse

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf239P24399 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Znf239P24399 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Znf239P24399 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Znf239P24399 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Znf239P24399 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Znf239P24399 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Znf239P24399 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Znf239P24399 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Znf239P24399 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC9.73□□□□□ -0.85
Znf239P24399 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC9.73□□□□□ -0.85
Znf239P24399 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC9.73□□□□□ -0.85
Znf239P24399 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Znf239P24399 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC9.73□□□□□ -0.85
Znf239P24399 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Znf239P24399 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC9.73□□□□□ -0.85
Znf239P24399 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC9.73□□□□□ -0.85
Znf239P24399 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC9.73□□□□□ -0.85
Znf239P24399 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC9.73□□□□□ -0.85
Znf239P24399 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Gm37171-201ENSMUST00000192636 1185 ntBASIC9.73□□□□□ -0.85
Znf239P24399 Gm43575-201ENSMUST00000196420 516 ntBASIC9.73□□□□□ -0.85
Znf239P24399 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 AC154262.2-202ENSMUST00000225158 1331 ntBASIC9.73□□□□□ -0.85
Znf239P24399 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC9.73□□□□□ -0.85
Znf239P24399 Gm9755-201ENSMUST00000032981 1356 ntBASIC9.73□□□□□ -0.85
Znf239P24399 Gm44942-201ENSMUST00000096093 2072 ntBASIC9.73□□□□□ -0.85
Znf239P24399 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Znf239P24399 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf239P24399 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf239P24399 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf239P24399 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Znf239P24399 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf239P24399 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf239P24399 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC9.72□□□□□ -0.85
Znf239P24399 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC9.72□□□□□ -0.85
Znf239P24399 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf239P24399 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf239P24399 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf239P24399 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Znf239P24399 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Znf239P24399 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf239P24399 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Znf239P24399 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf239P24399 Gm44758-201ENSMUST00000206096 2068 ntBASIC9.72□□□□□ -0.85
Znf239P24399 Gm10040-201ENSMUST00000080726 1662 ntBASIC9.72□□□□□ -0.85
Znf239P24399 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf239P24399 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC9.72□□□□□ -0.85
Znf239P24399 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Znf239P24399 Gm13616-201ENSMUST00000120600 222 ntBASIC9.72□□□□□ -0.85
Znf239P24399 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC9.72□□□□□ -0.85
Znf239P24399 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC9.72□□□□□ -0.85
Znf239P24399 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Znf239P24399 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Znf239P24399 Gm45484-201ENSMUST00000210310 1141 ntBASIC9.72□□□□□ -0.85
Znf239P24399 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC9.72□□□□□ -0.85
Znf239P24399 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf239P24399 AC126408.1-201ENSMUST00000225184 523 ntBASIC9.72□□□□□ -0.85
Znf239P24399 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC9.72□□□□□ -0.85
Znf239P24399 AC192088.1-201ENSMUST00000227561 301 ntBASIC9.72□□□□□ -0.85
Znf239P24399 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf239P24399 Gm9797-201ENSMUST00000052902 613 ntBASIC9.72□□□□□ -0.85
Znf239P24399 Gm20445-201ENSMUST00000061905 565 ntBASIC9.72□□□□□ -0.85
Znf239P24399 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf239P24399 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf239P24399 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms