Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.27□□□□□ -0.13
Pde6bP23440 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.27□□□□□ -0.13
Pde6bP23440 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.27□□□□□ -0.13
Pde6bP23440 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.27□□□□□ -0.13
Pde6bP23440 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pde6bP23440 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pde6bP23440 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pde6bP23440 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pde6bP23440 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pde6bP23440 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pde6bP23440 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pde6bP23440 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pde6bP23440 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pde6bP23440 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pde6bP23440 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pde6bP23440 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pde6bP23440 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pde6bP23440 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pde6bP23440 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pde6bP23440 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.26□□□□□ -0.13
Pde6bP23440 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.26□□□□□ -0.13
Pde6bP23440 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.26□□□□□ -0.13
Pde6bP23440 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pde6bP23440 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pde6bP23440 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.26□□□□□ -0.13
Pde6bP23440 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 Gm10608-202ENSMUST00000213924 676 ntBASIC14.26□□□□□ -0.13
Pde6bP23440 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.26□□□□□ -0.13
Pde6bP23440 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.26□□□□□ -0.13
Pde6bP23440 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pde6bP23440 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pde6bP23440 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6bP23440 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6bP23440 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6bP23440 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.25□□□□□ -0.13
Pde6bP23440 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6bP23440 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6bP23440 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pde6bP23440 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6bP23440 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6bP23440 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6bP23440 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.25□□□□□ -0.13
Pde6bP23440 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6bP23440 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6bP23440 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.25□□□□□ -0.13
Pde6bP23440 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6bP23440 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.25□□□□□ -0.13
Pde6bP23440 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6bP23440 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6bP23440 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6bP23440 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.25□□□□□ -0.13
Pde6bP23440 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6bP23440 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.25□□□□□ -0.13
Pde6bP23440 Gm11637-201ENSMUST00000120601 592 ntBASIC14.25□□□□□ -0.13
Pde6bP23440 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.25□□□□□ -0.13
Pde6bP23440 Gm26185-201ENSMUST00000157692 266 ntBASIC14.25□□□□□ -0.13
Pde6bP23440 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6bP23440 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6bP23440 Gm38341-201ENSMUST00000195357 515 ntBASIC14.25□□□□□ -0.13
Pde6bP23440 Gm43758-201ENSMUST00000199500 367 ntBASIC14.25□□□□□ -0.13
Pde6bP23440 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.25□□□□□ -0.13
Pde6bP23440 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Pde6bP23440 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6bP23440 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6bP23440 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.25□□□□□ -0.13
Pde6bP23440 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.25□□□□□ -0.13
Pde6bP23440 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6bP23440 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms