Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cd48P18181 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cd48P18181 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cd48P18181 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cd48P18181 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cd48P18181 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cd48P18181 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Cd48P18181 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Cd48P18181 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.73□□□□□ -0.53
Cd48P18181 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cd48P18181 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cd48P18181 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cd48P18181 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.73□□□□□ -0.53
Cd48P18181 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cd48P18181 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cd48P18181 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.73□□□□□ -0.53
Cd48P18181 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cd48P18181 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.73□□□□□ -0.53
Cd48P18181 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.73□□□□□ -0.53
Cd48P18181 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cd48P18181 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.73□□□□□ -0.53
Cd48P18181 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.73□□□□□ -0.53
Cd48P18181 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.73□□□□□ -0.53
Cd48P18181 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.73□□□□□ -0.53
Cd48P18181 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Cd48P18181 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Cd48P18181 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cd48P18181 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.73□□□□□ -0.53
Cd48P18181 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cd48P18181 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cd48P18181 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cd48P18181 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cd48P18181 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Cd48P18181 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cd48P18181 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.73□□□□□ -0.53
Cd48P18181 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cd48P18181 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cd48P18181 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cd48P18181 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cd48P18181 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cd48P18181 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cd48P18181 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cd48P18181 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cd48P18181 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cd48P18181 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cd48P18181 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Cd48P18181 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cd48P18181 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cd48P18181 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cd48P18181 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cd48P18181 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cd48P18181 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cd48P18181 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cd48P18181 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cd48P18181 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cd48P18181 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.72□□□□□ -0.53
Cd48P18181 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cd48P18181 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.72□□□□□ -0.53
Cd48P18181 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cd48P18181 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cd48P18181 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cd48P18181 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Cd48P18181 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.72□□□□□ -0.53
Cd48P18181 Gm26464-201ENSMUST00000157094 305 ntBASIC11.72□□□□□ -0.53
Cd48P18181 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.72□□□□□ -0.53
Cd48P18181 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cd48P18181 Gm5354-201ENSMUST00000182417 973 ntBASIC11.72□□□□□ -0.53
Cd48P18181 Gm28760-201ENSMUST00000185995 736 ntBASIC11.72□□□□□ -0.53
Cd48P18181 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cd48P18181 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.72□□□□□ -0.53
Cd48P18181 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cd48P18181 Gm5867-201ENSMUST00000063197 592 ntBASIC11.72□□□□□ -0.53
Cd48P18181 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cd48P18181 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cd48P18181 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cd48P18181 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cd48P18181 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.72□□□□□ -0.53
Cd48P18181 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cd48P18181 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.72□□□□□ -0.53
Cd48P18181 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Cd48P18181 Paupar-201ENSMUST00000194826 3482 ntBASIC11.72□□□□□ -0.53
Cd48P18181 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
Cd48P18181 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cd48P18181 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cd48P18181 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Cd48P18181 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Cd48P18181 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cd48P18181 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cd48P18181 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cd48P18181 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cd48P18181 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cd48P18181 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cd48P18181 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cd48P18181 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cd48P18181 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cd48P18181 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.71□□□□□ -0.53
Cd48P18181 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Cd48P18181 Gm15371-201ENSMUST00000117057 784 ntBASIC11.71□□□□□ -0.53
Cd48P18181 Gm14719-201ENSMUST00000121891 340 ntBASIC11.71□□□□□ -0.53
Cd48P18181 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms