Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.42□□□□□ -0.26
Rb1P13405 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.42□□□□□ -0.26
Rb1P13405 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Rb1P13405 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Rb1P13405 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.42□□□□□ -0.26
Rb1P13405 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Rb1P13405 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rb1P13405 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rb1P13405 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rb1P13405 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rb1P13405 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rb1P13405 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.42□□□□□ -0.26
Rb1P13405 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Rb1P13405 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rb1P13405 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rb1P13405 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Rb1P13405 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rb1P13405 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rb1P13405 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rb1P13405 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rb1P13405 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Rb1P13405 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rb1P13405 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Rb1P13405 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rb1P13405 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rb1P13405 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.41□□□□□ -0.26
Rb1P13405 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rb1P13405 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rb1P13405 Gm23931-201ENSMUST00000103842 109 ntBASIC13.41□□□□□ -0.26
Rb1P13405 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.41□□□□□ -0.26
Rb1P13405 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rb1P13405 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.41□□□□□ -0.26
Rb1P13405 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rb1P13405 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rb1P13405 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rb1P13405 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Rb1P13405 Mir497b-201ENSMUST00000093601 125 ntBASIC13.41□□□□□ -0.26
Rb1P13405 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rb1P13405 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rb1P13405 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.41□□□□□ -0.26
Rb1P13405 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rb1P13405 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rb1P13405 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rb1P13405 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rb1P13405 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Rb1P13405 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rb1P13405 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rb1P13405 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rb1P13405 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rb1P13405 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rb1P13405 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rb1P13405 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rb1P13405 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rb1P13405 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Rb1P13405 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rb1P13405 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.4□□□□□ -0.26
Rb1P13405 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rb1P13405 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rb1P13405 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Rb1P13405 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Rb1P13405 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rb1P13405 Gm11803-201ENSMUST00000119966 444 ntBASIC13.4□□□□□ -0.26
Rb1P13405 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rb1P13405 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.4□□□□□ -0.26
Rb1P13405 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rb1P13405 Gm8584-201ENSMUST00000171982 758 ntBASIC13.4□□□□□ -0.26
Rb1P13405 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Rb1P13405 Gm29741-201ENSMUST00000192667 421 ntBASIC13.4□□□□□ -0.26
Rb1P13405 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.4□□□□□ -0.26
Rb1P13405 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rb1P13405 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.4□□□□□ -0.26
Rb1P13405 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.4□□□□□ -0.26
Rb1P13405 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.4□□□□□ -0.26
Rb1P13405 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rb1P13405 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rb1P13405 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Rb1P13405 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rb1P13405 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rb1P13405 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.4□□□□□ -0.26
Rb1P13405 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rb1P13405 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rb1P13405 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.4□□□□□ -0.26
Rb1P13405 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rb1P13405 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rb1P13405 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rb1P13405 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Rb1P13405 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Rb1P13405 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rb1P13405 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.39□□□□□ -0.27
Rb1P13405 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.39□□□□□ -0.27
Rb1P13405 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rb1P13405 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rb1P13405 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rb1P13405 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Rb1P13405 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rb1P13405 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rb1P13405 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Rb1P13405 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rb1P13405 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Rb1P13405 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms