Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RaraP11416 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RaraP11416 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RaraP11416 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RaraP11416 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RaraP11416 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RaraP11416 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
RaraP11416 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RaraP11416 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RaraP11416 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RaraP11416 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.11□□□□□ -0.15
RaraP11416 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RaraP11416 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RaraP11416 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RaraP11416 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RaraP11416 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RaraP11416 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.11□□□□□ -0.15
RaraP11416 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RaraP11416 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RaraP11416 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RaraP11416 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RaraP11416 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RaraP11416 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RaraP11416 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RaraP11416 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
RaraP11416 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RaraP11416 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RaraP11416 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RaraP11416 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RaraP11416 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RaraP11416 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
RaraP11416 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RaraP11416 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RaraP11416 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RaraP11416 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RaraP11416 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RaraP11416 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.1□□□□□ -0.15
RaraP11416 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.1□□□□□ -0.15
RaraP11416 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RaraP11416 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RaraP11416 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RaraP11416 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RaraP11416 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RaraP11416 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RaraP11416 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RaraP11416 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
RaraP11416 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.1□□□□□ -0.15
RaraP11416 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RaraP11416 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RaraP11416 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.1□□□□□ -0.15
RaraP11416 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RaraP11416 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.1□□□□□ -0.15
RaraP11416 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RaraP11416 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RaraP11416 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.1□□□□□ -0.15
RaraP11416 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RaraP11416 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RaraP11416 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RaraP11416 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
RaraP11416 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RaraP11416 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RaraP11416 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
RaraP11416 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RaraP11416 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RaraP11416 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.09□□□□□ -0.15
RaraP11416 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.09□□□□□ -0.15
RaraP11416 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RaraP11416 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.09□□□□□ -0.15
RaraP11416 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RaraP11416 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RaraP11416 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.09□□□□□ -0.15
RaraP11416 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.09□□□□□ -0.15
RaraP11416 Gm14350-201ENSMUST00000116642 640 ntBASIC14.09□□□□□ -0.15
RaraP11416 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.09□□□□□ -0.15
RaraP11416 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RaraP11416 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RaraP11416 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RaraP11416 Gm18307-201ENSMUST00000206864 949 ntBASIC14.09□□□□□ -0.15
RaraP11416 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RaraP11416 Gm19220-201ENSMUST00000222682 803 ntBASIC14.09□□□□□ -0.15
RaraP11416 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.09□□□□□ -0.15
RaraP11416 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RaraP11416 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
RaraP11416 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RaraP11416 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RaraP11416 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RaraP11416 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RaraP11416 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RaraP11416 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RaraP11416 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RaraP11416 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RaraP11416 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RaraP11416 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RaraP11416 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RaraP11416 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
RaraP11416 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RaraP11416 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RaraP11416 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RaraP11416 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RaraP11416 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms