Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl1P10146 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Ccl1P10146 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC10.1□□□□□ -0.79
Ccl1P10146 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl1P10146 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl1P10146 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl1P10146 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl1P10146 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl1P10146 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl1P10146 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl1P10146 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl1P10146 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
Ccl1P10146 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl1P10146 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl1P10146 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
Ccl1P10146 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC10.09□□□□□ -0.79
Ccl1P10146 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.09□□□□□ -0.79
Ccl1P10146 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl1P10146 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Ccl1P10146 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl1P10146 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl1P10146 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl1P10146 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Ccl1P10146 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Ccl1P10146 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.09□□□□□ -0.79
Ccl1P10146 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Ccl1P10146 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Ccl1P10146 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.09□□□□□ -0.79
Ccl1P10146 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl1P10146 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl1P10146 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl1P10146 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC10.09□□□□□ -0.79
Ccl1P10146 Gm13385-201ENSMUST00000121089 220 ntBASIC10.09□□□□□ -0.79
Ccl1P10146 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl1P10146 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl1P10146 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl1P10146 Gm33320-201ENSMUST00000192232 530 ntBASIC10.09□□□□□ -0.79
Ccl1P10146 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC10.09□□□□□ -0.79
Ccl1P10146 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC10.09□□□□□ -0.79
Ccl1P10146 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl1P10146 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC10.09□□□□□ -0.79
Ccl1P10146 AC174742.1-201ENSMUST00000218272 304 ntBASIC10.09□□□□□ -0.79
Ccl1P10146 AC154806.6-201ENSMUST00000228192 202 ntBASIC10.09□□□□□ -0.79
Ccl1P10146 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl1P10146 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl1P10146 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl1P10146 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.09□□□□□ -0.79
Ccl1P10146 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl1P10146 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl1P10146 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.09□□□□□ -0.79
Ccl1P10146 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Ccl1P10146 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl1P10146 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl1P10146 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl1P10146 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.09□□□□□ -0.79
Ccl1P10146 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl1P10146 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC10.09□□□□□ -0.79
Ccl1P10146 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl1P10146 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl1P10146 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ccl1P10146 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl1P10146 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.08□□□□□ -0.8
Ccl1P10146 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl1P10146 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl1P10146 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl1P10146 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.08□□□□□ -0.8
Ccl1P10146 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl1P10146 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC10.08□□□□□ -0.8
Ccl1P10146 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl1P10146 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl1P10146 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl1P10146 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl1P10146 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl1P10146 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl1P10146 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Ccl1P10146 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl1P10146 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.08□□□□□ -0.8
Ccl1P10146 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl1P10146 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl1P10146 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl1P10146 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC10.08□□□□□ -0.8
Ccl1P10146 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl1P10146 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl1P10146 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl1P10146 Gm8116-201ENSMUST00000182917 1201 ntBASIC10.08□□□□□ -0.8
Ccl1P10146 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl1P10146 Gm21470-201ENSMUST00000187680 696 ntBASIC10.08□□□□□ -0.8
Ccl1P10146 Gm19931-201ENSMUST00000198920 368 ntBASIC10.08□□□□□ -0.8
Ccl1P10146 Gm9449-201ENSMUST00000207265 1011 ntBASIC10.08□□□□□ -0.8
Ccl1P10146 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC10.08□□□□□ -0.8
Ccl1P10146 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl1P10146 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl1P10146 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl1P10146 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl1P10146 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Ccl1P10146 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl1P10146 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Ccl1P10146 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl1P10146 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ccl1P10146 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms